| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2265 |
|---|
| Symbol | |
|---|
| ID | 3924623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2529013 |
|---|
| End bp | 2529900 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637897873 |
|---|
| Product | Pre-mRNA processing ribonucleoprotein, binding region |
|---|
| Protein accession | YP_503689 |
|---|
| Protein GI | 88603511 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.310943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAA ATCAGGTCAA TCGGGCATTT CAGTATTGGT ATGAGGCCCT TCAACAGGGA
CCGGCGGATT TTTTGACTCC TGCCACTTCA TCCTTGGCGG ATATAATCGA CACTATACGC
GAGAGCCGTG GCAAATCGGA ATTACTCCCC TTACCTCTTT GGGAGGAGGC AGTCAGCGCC
GGGTTTGTTC CTGACCGGAA TGGATATCTG TCAATCCTTC AGGACATTGC AATCGGGCTG
ACTATTCGTG ACCTAGAAGA GCGATGTGAT AAAGACGAGG CAGCACTCAT CCATCTTATC
AGAATCCTTG ATGAGATTGA TCAATCTATT GCCCGTCTGT CGGAGAAGAT TGAGGATTAC
TATATTGCAC TGCACCCCGC CGGACTATCC GGGTATGAAA GGAATATCAG TTCTCTTATC
GAGAGTCTGG CAAAAGATCA GACGCAACCG ATGAGTCACC TTGCAAGAAA TATCCAGCGG
TTCCGTGAAT CCCGGACTCT TATCTCACAG AATGTTCGTG ATTACGCAAC AAAATGCCTG
CCAAATATGT CTGCCTTATG CGGCCCACTT GTGAGTGCCC GTCTTCTTGC AGGAGCGGGA
AGTAAATATC ATCTTGCCGG TATGCCCGCA GCATCAATTC AGGTACTGGG AGCTGGACCA
TCATTATTTA TGCATCTGAC AAGCGGGACA AATCCCCCGA AACATGGTAT CATATACCAG
TATAAGGGAG TCCATCATGC AAAACGACGG GTCAGAGGAA GAGTGAGCAG AGTACTTGCA
TGTCAGCTGG CAATCGCTGC AAGGATAGAT TATTTCAGGG GAGCTTTAGA TGATGAGTTT
ATCAGAAAAG CTGGTGAGAA GATATGCCGG GCAGGGAAGA CGGATTGA
|
|---|
| Protein sequence | MAKNQVNRAF QYWYEALQQG PADFLTPATS SLADIIDTIR ESRGKSELLP LPLWEEAVSA
GFVPDRNGYL SILQDIAIGL TIRDLEERCD KDEAALIHLI RILDEIDQSI ARLSEKIEDY
YIALHPAGLS GYERNISSLI ESLAKDQTQP MSHLARNIQR FRESRTLISQ NVRDYATKCL
PNMSALCGPL VSARLLAGAG SKYHLAGMPA ASIQVLGAGP SLFMHLTSGT NPPKHGIIYQ
YKGVHHAKRR VRGRVSRVLA CQLAIAARID YFRGALDDEF IRKAGEKICR AGKTD
|
|---|
| |