| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2255 |
|---|
| Symbol | |
|---|
| ID | 3924216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2516380 |
|---|
| End bp | 2517222 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637897861 |
|---|
| Product | F420-dependent methylenetetrahydromethanopterin dehydrogenase |
|---|
| Protein accession | YP_503679 |
|---|
| Protein GI | 88603501 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1927] Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00566226 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTAA AAGTAGGAAT TGCAAAACTC GGAAATATTG CCAGCGGCGT TATGGCAGAA
CTTCTCCTCG ATGAGCGTGC AGACCGTGAA GATATGCAGA CCTTCATGGC AACATCCGGT
ACCAAGCTTC AGCCTGAAGA TATCGACCGT GTTGTTACCA ACATGAAGGC ATGGGGTCCG
GACTTCTGCA TTGTCGTCTC ACCAAACGGA GTTCTCCCAG GTCCAAAGGG CGCACGTGAA
GCACTTGCAG CTGCAGGTAT CCCATGTGTT GTCATTACCG ACGATATCAC CACCAAGAAG
GAAGAATGGG AAGCACTGAA GGCAAGCGAA TTTGGATACG TCATCATGAA GGGTGACTCC
ATGATTGGTG CACGCCGTGA ATTCCTTGAC CCCATCGAAA TGGCTGACTA CAACGGAAAC
CTCATCAAAG TACTCTCCAT TACCGGAGCA TTCCGCAAAC TTCAGGTTGC CCTCGATGAA
GTCATCGACC AGGTAAAAGC AGGAAAGAAG GGCAAGGACC TTGCACTCCC CAAGCTCGTC
ATGACATCAG ACAAGGCTGT TGAAGGCGAA TTCAGCAACC CATATGCATA TGCCAAGGCC
CGTGCAGCAT ACGAAATCGC GCAGGCAGTA GCCGGTGTCA ATGTCAAGGG TTGTTTCATG
ACCAAGGGCT TTGAGAACTA CACCCCAATC GTTGCATCCG CACATGAGAT GATGCGCCAG
GCAATGCTCC TCTGTGAAGA AGCACGCGAG ATGGAAAAGG CAACTGACGC TGTCATCCGC
AAGCCGCACA AGAACGATGG AACCCGGGTT GCAAAGAAGA CCCTCATCAG CAAACCAGAG
TAA
|
|---|
| Protein sequence | MVVKVGIAKL GNIASGVMAE LLLDERADRE DMQTFMATSG TKLQPEDIDR VVTNMKAWGP
DFCIVVSPNG VLPGPKGARE ALAAAGIPCV VITDDITTKK EEWEALKASE FGYVIMKGDS
MIGARREFLD PIEMADYNGN LIKVLSITGA FRKLQVALDE VIDQVKAGKK GKDLALPKLV
MTSDKAVEGE FSNPYAYAKA RAAYEIAQAV AGVNVKGCFM TKGFENYTPI VASAHEMMRQ
AMLLCEEARE MEKATDAVIR KPHKNDGTRV AKKTLISKPE
|
|---|
| |