Gene Mhun_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2203 
Symbol 
ID3923336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2472369 
End bp2473550 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content46% 
IMG OID637897809 
Productaminotransferase, class V 
Protein accessionYP_503627 
Protein GI88603449 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.697874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.788418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAC AGACGATTCG GGAAGATATA CCGCTCACTC GGGATCTTAT TTATTTTGAT 
AATGCATCTA CCAGCCTGAT GCCATCATCA GTAACGCGGA TTATGGAGGA TTATGAGACT
TCATTCAGAT CAAATGTAGG AAGAGGGGTT CACCGTCTCT CCCAGGTGAG TTCACAACTC
TATTGGGATG CACATGAGAA GGTAAAAGCA TTCATTGGTG GAACAGACGG GGTTAGTATT
TTTGGAAAAA ACTGCACTGA AGGGATAAAC CAGGTCGCGT ATGGCCTCCG ACTGAATCCG
GGGGATCATG TAATCACATC AGTCCTGGAG CATCATTCCA ACATACTCCC ATGGATGCAC
CTGCGAAAAC AGGGTATCAG CGTGGACTTT GTCAGGCCTG ATGCAGAGGG ATATCTGCAC
CCCCAGTCCT TTTCAGAACT CATTCAAAAG GAGACCAGAC TTATTACCTT CACCCACGTT
TCAAATGTAA CAGGAACCAT CCAGCCGGCA AAAGAGATAT GTTCTATCTC TCATGACCAT
GATATAAAAA CCCTGCTAGA CGGTGCACAG TCCGTACCCC ATATTCCGGT TGACGTATCA
GATATTGGGT GCGATTATCT CTCATTCTCC GGCCATAAGA TGCTTGGGCC AACCGGAACT
GGTGTCCTCT GGATGAAAGA GCCAGACCTG GAACCATTTA TTCTGGGTGG CGGGAGCATC
AAATCGGTAA CGACCAGCGA ATACACGTTG GAAGACGGTT ATATGAAATA TGAAGCAGGT
ACCCCTCACA TAACCGGAGC AGTGGGCCTT CGAGAAGCCA TAAGAATTCT AAACCATGTT
GGGATGAGAT CTGTTCAGGA ACATGAATTA TCCCTGACAC GGGATATAAT ACACGGGCTT
TCTCATATAC CCGGAGTTAC ATTGTACGGA CCAAAAGGAA CAGACTCACG TCTTGGTGTT
GTCTCTTTTA CTATCGAGGG TCAGCATCCG CATGAATCAG CCCATCTGCT GGATGATCAA
TATGACATCA TGGTTCGATC CGGTCATCAT TGCTGTATGC CATTGATGGA TCATTTCGCG
ATCCCGGATG GAACGGTCAG GGCAAGCCTG TATCTCTATA ATACAAGAGA AGAAGTTAAA
AAATTTCTAG AAGCGGTGAC AGAAATCTCG GAGGGTATCT GA
 
Protein sequence
MNIQTIREDI PLTRDLIYFD NASTSLMPSS VTRIMEDYET SFRSNVGRGV HRLSQVSSQL 
YWDAHEKVKA FIGGTDGVSI FGKNCTEGIN QVAYGLRLNP GDHVITSVLE HHSNILPWMH
LRKQGISVDF VRPDAEGYLH PQSFSELIQK ETRLITFTHV SNVTGTIQPA KEICSISHDH
DIKTLLDGAQ SVPHIPVDVS DIGCDYLSFS GHKMLGPTGT GVLWMKEPDL EPFILGGGSI
KSVTTSEYTL EDGYMKYEAG TPHITGAVGL REAIRILNHV GMRSVQEHEL SLTRDIIHGL
SHIPGVTLYG PKGTDSRLGV VSFTIEGQHP HESAHLLDDQ YDIMVRSGHH CCMPLMDHFA
IPDGTVRASL YLYNTREEVK KFLEAVTEIS EGI