Gene Mhun_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2196 
Symbol 
ID3923329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2465389 
End bp2466081 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID637897802 
ProductABC transporter related 
Protein accessionYP_503620 
Protein GI88603442 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.439888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.425297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTA TCGCAGTTTC TGATCTTGCC AAGGTGTACA AACGTGGTGC CGAAGAGGTG 
CATGCACTCC GGGGAGTCAG TCTCAGCGTG AATGCCGGAG AATTTGTATC GATAGTCGGG
CCTTCCGGAT CCGGAAAGAC TGCACTCCTC AACCTGCTGG GCTGTCTTGA TACACCAACC
GGCGGAATTA TCTCCATCAA CGGAACCGAT GTCACGACGC TTCCTGAAAG CCGGCGTGTC
CTGATCAGGA GAGAACAGAT AGGATTTGTG TTCCAGCAGT TCTTTCTCAT CCCGACCCTG
AATGCAAAGG AGAATATCCT CCTCCCGTTA ACATTCAGTA AAAAGCAGGT TGATGAATCA
AGAGCACGGG AGATTTTGGA GATGGTGGGA CTATCACATA GGGAGAATCA TCTTCCCCAT
GAACTCTCCG GCGGCGAGAT GCAACGGGTG GCCATTGGAA GGGCATTGAT CAATGATCCA
AAGATCATTC TCGCTGATGA GCCTACCGGC AATCTTGACA GTCACACCGC TGAACAAATG
TATGGGATAT TTGAGGAACT GGTGGAAAGA GGGTATACGG TTATAATTGT TACTCACAAT
ACCGAGCTAG CCCATCGGGC ACACCGGGTA ATTCGTCTGC GGGATGGGCA TTTAGAGCCG
GATGAACCCT GTGTTTGTCA GGATAATACC TGA
 
Protein sequence
MTVIAVSDLA KVYKRGAEEV HALRGVSLSV NAGEFVSIVG PSGSGKTALL NLLGCLDTPT 
GGIISINGTD VTTLPESRRV LIRREQIGFV FQQFFLIPTL NAKENILLPL TFSKKQVDES
RAREILEMVG LSHRENHLPH ELSGGEMQRV AIGRALINDP KIILADEPTG NLDSHTAEQM
YGIFEELVER GYTVIIVTHN TELAHRAHRV IRLRDGHLEP DEPCVCQDNT