| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2146 |
|---|
| Symbol | |
|---|
| ID | 3922303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2423298 |
|---|
| End bp | 2423933 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637897751 |
|---|
| Product | methyl-coenzyme M reductase operon protein C |
|---|
| Protein accession | YP_503571 |
|---|
| Protein GI | 88603393 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4056] Methyl coenzyme M reductase, subunit C |
|---|
| TIGRFAM ID | [TIGR03264] methyl-coenzyme M reductase I operon protein C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.272678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATCG GACGGGTAAC ACAGGTTGTA GACTGCCGCG AAAGTGCGGG TATGGGAAAA
GGAGGGGCCC TTGCCCAAAG GGGGACGATC TCCGAATGCC GATATCCTGA CGTCATCATC
ATAGGGATGT CCCCCGGTCG CCGGCATGTC ACAAAGCCGG TCTGTGATAT CACGTCTGCC
CTGCGGGCAC AGGGGGTTGA ATATAGTATC AGCACCATGA TTCTCAACGC GGGCTCCGGG
ATTCCCCCTG ATGCCCCAAA GAGTGCCGGT CATGTGCTGG GAGCATATTT CGGCCTGAAT
GAGAAGGAAA TAATCCAGGT TAACCGCCAT AAAGTTGCGG TTCTGCACCA TGGAAATGTC
AGATCACATA TCGTCCATAA GGTCAGGTCT ATCTTAAAGG ACTGTGATAT TCCGGCGGTT
GTAGTCTGTC AGGCCCCTGT TGATTACGAG GATTTTGCAA AGGAAGGGGT GAAAACGGCG
TTTGTGATGC CTACTGAAGA GAATGTCCGG ACAAAAGGGA CAGTTATGGC GATTGTCAGT
GGTGTCACGA GGGGTCAGAC CCCGTCACGT GAGAAGATCA GCGAAGTCAT TCACGAAGTC
ATGAAACTTA TGAAAACTTC AGATTTGGAG AGATAA
|
|---|
| Protein sequence | MPIGRVTQVV DCRESAGMGK GGALAQRGTI SECRYPDVII IGMSPGRRHV TKPVCDITSA
LRAQGVEYSI STMILNAGSG IPPDAPKSAG HVLGAYFGLN EKEIIQVNRH KVAVLHHGNV
RSHIVHKVRS ILKDCDIPAV VVCQAPVDYE DFAKEGVKTA FVMPTEENVR TKGTVMAIVS
GVTRGQTPSR EKISEVIHEV MKLMKTSDLE R
|
|---|
| |