Gene Mhun_2136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2136 
Symbol 
ID3922293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2414152 
End bp2415093 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content44% 
IMG OID637897741 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_503561 
Protein GI88603383 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0794715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.286988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGC GATATCTTGT CACGGGTGGT GCAGGCTTTA TCGGTTCACA TCTCAGTCAG 
GCACTGGCAG CCAGGGGTGA CCGGGTCATC ATTCTTGATT CACTTGATTC TGGAAAATTG
TGTAATATCT CCGACCTTCT TGAAGATGAC CATGTTGAGT TTATTGAAGA TACAATTTTA
AATGGTTCCC GACTTGTTTC ACTTTGTAAC GGCATTGACG GGATATTCCA TCTTGCTGCC
CTGGTGTCAG TCCAGCGTTC AATTGATGAT CCTCGATTAA ATCACCGGAT AAATATTGAT
GGGCTTTTTG AAGTATTCGA GGCTGCGAGA CTTGCCAGGG TTCCTAAAAT TGTACTTGCA
TCATCTGCCG CCCTCTATGG AAATGACTAT CTTCCGCCCC ATAAAGAGAC ATTTGCTTCG
GTTCCTCTTT CGCCATACGC AGTTGGAAAA TGTCTTTCTG AATTATACGC TGCAGTGTAT
ACTGATTTAT ATGGTGTTCA TTCGGTTTGC TTACGGTTTT TTAATGTATA TGGTCCGAAA
CAGGATCCTT CTTCTCCCTA TTCAGGGGTA ATATCCAAAT TCATGGATGC CATCTCCCGG
GACGATGGGT TTACGATATT TGGAGATGGA GAACAGACCC GGGATTTTGT CTATGTTCTG
GATGTCGTTC AGGCTTTAAT CCTTTCAATG GAGAAGAGTG TATCTGGTGT CTTTAATGTT
GGTACTGGTG CGAGTGTATC GATTAATCAC CTTGCCAGGA CAATTATGGA GGTTTCAGGG
AAAAAGGTGG GGATTCGATA TCTTGATGCC CGTGATGGGG AAGTCAGGCA TTCGTGTGCA
GATATTTCAA AGATATCTGA TGGAATGGGG TATAAGCCCG GGTATTCACT GATAGAGGGG
CTTAGTGAGA CGTATTCATG GTGGATAGAA AAACAGGGTT AA
 
Protein sequence
MSKRYLVTGG AGFIGSHLSQ ALAARGDRVI ILDSLDSGKL CNISDLLEDD HVEFIEDTIL 
NGSRLVSLCN GIDGIFHLAA LVSVQRSIDD PRLNHRINID GLFEVFEAAR LARVPKIVLA
SSAALYGNDY LPPHKETFAS VPLSPYAVGK CLSELYAAVY TDLYGVHSVC LRFFNVYGPK
QDPSSPYSGV ISKFMDAISR DDGFTIFGDG EQTRDFVYVL DVVQALILSM EKSVSGVFNV
GTGASVSINH LARTIMEVSG KKVGIRYLDA RDGEVRHSCA DISKISDGMG YKPGYSLIEG
LSETYSWWIE KQG