Gene Mhun_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2101 
Symbol 
ID3924494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2376156 
End bp2376998 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content50% 
IMG OID637897707 
Productrespiratory-chain NADH dehydrogenase, subunit 1 
Protein accessionYP_503527 
Protein GI88603349 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.614547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACAC TGATACTTCC AGCAGTTTTT ATCGGCCTTT TGTTTCATGG TATACATCGA 
AAAGTCATCG CACGGATACA GGGAAGACCT GGCCCGCCGA TCTGGCAGGA GATACTCCAT
ACCTTAAAAT TCTCCTTTAA GCAGACATGG ATTCCGAAAA CGGCAAGCAT GCCTATGTTT
GTCTTTATCG TGGCGGTTTC CATAGCCATC TGGACTGGTG CATTCTATAT CATCTTCAGT
GGCGGCAGTC TGCTCCTCCT CTTCGCGGTA TTTATGCTCC ATAAGATCAC CGAACACGGG
CTCGGGCTCT CGTCTGGTTC ACCATACGGA AAGTTTGGGG CAATACGGTC GGTGATGTCT
GCAGCATCAG AGATTCCGCT CTTTGCAACC ATTGCAGGGA TATATGTGGT GACCGGTTCC
CTGATGATCA GCGATATAAC CAGGTATCAG GAGATGCACG GGCCCATGCT CGTCGGGGCA
TTCCCGATAG CCATCGCCAT GTACATTGTC ATACTCTCCA AGATGCATTA TGGCCCGTTC
TCAATCATTG AGGCGAAAGA GATCGTATCA GGGAACCGTA CCGAGCACTT TGGTGTCTGG
AGGGCCGGTC TTGAAGTGGC CTATGCATTA AAAACCTTCG TACTTCTGGC AGCATTTGTT
CTGCTCTTTA TCGGTGCCCT CCCCTGGTAC CTGATGCTCC TTGCAATGCT TATCGTCCTG
ATATCACTCT CCTTTGTCTG TGCATTCACG CCGATGCTCT CGCCATTTGA TGCGGTTGCC
CTGCAGACGG TGATCACCGG GGTCCTCGCA GTGTATATTA TCATTCTCGG GGTGATGGGA
TGA
 
Protein sequence
MITLILPAVF IGLLFHGIHR KVIARIQGRP GPPIWQEILH TLKFSFKQTW IPKTASMPMF 
VFIVAVSIAI WTGAFYIIFS GGSLLLLFAV FMLHKITEHG LGLSSGSPYG KFGAIRSVMS
AASEIPLFAT IAGIYVVTGS LMISDITRYQ EMHGPMLVGA FPIAIAMYIV ILSKMHYGPF
SIIEAKEIVS GNRTEHFGVW RAGLEVAYAL KTFVLLAAFV LLFIGALPWY LMLLAMLIVL
ISLSFVCAFT PMLSPFDAVA LQTVITGVLA VYIIILGVMG