Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_2079 |
Symbol | |
ID | 3923663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 2356488 |
End bp | 2357720 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637897685 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_503505 |
Protein GI | 88603327 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.655722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATCC TCCATACCTC GGACTGGCAC CTCGGGAACC AGATCTGCGG GCGTAAACGA TACGATGAAC ACGAACAATT CCTCTCATGG CTCTTATCCC TCATTAACCG GGAAGGGGTT GATATCCTCA TCGTTGCAGG AGATATATTT GATACAACCA CCCCGCCGAA CCGTTCCCTG GAGCAATATT ACCAGTTCCT TGCAAGAGCT GCCGGATCCT CCTGCAGGCA GATCATCATT ACCGCCGGAA ACCATGACTC CCCCTCCCTT ATTGCAGCAC CACGGGAGCT CTGCAAATAC CTGAATATCA CCGTCGTCGG TCAGGTGCCG GATGATCCTG AGGAACTTAT CACCATATTG AAAGACCAGG ACGGGAGACC CGAACTTATC ATCTGTCCGG TCCCGTACCT CCGTGACCGG GATGTCAGAA CCATGCAGGC AGGGGAGAGT GCCGGAGAGA AGGCGGCAAA CCTTATTGAA GGGATAAAAG CCCGATATCA TGCAATTGGT TCCTGTGCAG AAAAGATGCG GGAGGAGATG GGAGATTTCA TCCCGATTAT TGCAACCGGA CATCTGTTTG CTGCAGGAGG CATAACCAGG GAAGATGACG GCTGTCGTGA CCTGTACCTG GGAACACTCG CCAGTGTCGG GGCTGATGCG TTTCCTTCCT GCATCGATTA CCTGGCGCTC GGTCACCTGC ACCTTCCCCA GAGAGTATGT GGGAATGACC GGATGCGATA CAGTGGTGCA CCCCTGCCTA TGGGATTTGG AGAGGCCGGG CAGACGAAAT CGGTCCTCAT GCTTGATGTG CAGGATTCAC GCAATATGTC GGTGAAAGAG ATCCCGGTCC CGGTATTTCA ACAATTACGC AGAATATCAG GAGCGTTTGA AGAGGTATTA AAGGAACTTG GCAGATTGAA GATGGAGTAC TCTCCTGCCC TGGTTGAGGT AATTCTTGAA GATCCCCGTA TCATTCCAGA CGCGTCGGAG AGGATCCGAA CCACTATTCA GGGATCACCT GTTGAGGTCC TGAAAGTGAA AGCTCAGCGG ATATCTGCAC AGGCAATGCA ACCTGAACGT GCTGAAGAGT CCCTGGCCGG GCTTTCTCCT GAAGAGGTAT TTCACAGACG GCTTGATGCT GCAGAAATCC CGAAGGAAGA ACGTCAGGAA CTTCTTGAAT CATTCCATGA AATCTACTCA GAACTGCTGG AAGAGGACAC CAATTCGGAG TGA
|
Protein sequence | MKILHTSDWH LGNQICGRKR YDEHEQFLSW LLSLINREGV DILIVAGDIF DTTTPPNRSL EQYYQFLARA AGSSCRQIII TAGNHDSPSL IAAPRELCKY LNITVVGQVP DDPEELITIL KDQDGRPELI ICPVPYLRDR DVRTMQAGES AGEKAANLIE GIKARYHAIG SCAEKMREEM GDFIPIIATG HLFAAGGITR EDDGCRDLYL GTLASVGADA FPSCIDYLAL GHLHLPQRVC GNDRMRYSGA PLPMGFGEAG QTKSVLMLDV QDSRNMSVKE IPVPVFQQLR RISGAFEEVL KELGRLKMEY SPALVEVILE DPRIIPDASE RIRTTIQGSP VEVLKVKAQR ISAQAMQPER AEESLAGLSP EEVFHRRLDA AEIPKEERQE LLESFHEIYS ELLEEDTNSE
|
| |