Gene Mhun_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2079 
Symbol 
ID3923663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2356488 
End bp2357720 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content52% 
IMG OID637897685 
Productnuclease SbcCD, D subunit 
Protein accessionYP_503505 
Protein GI88603327 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID[TIGR00619] exonuclease SbcD 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.655722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC TCCATACCTC GGACTGGCAC CTCGGGAACC AGATCTGCGG GCGTAAACGA 
TACGATGAAC ACGAACAATT CCTCTCATGG CTCTTATCCC TCATTAACCG GGAAGGGGTT
GATATCCTCA TCGTTGCAGG AGATATATTT GATACAACCA CCCCGCCGAA CCGTTCCCTG
GAGCAATATT ACCAGTTCCT TGCAAGAGCT GCCGGATCCT CCTGCAGGCA GATCATCATT
ACCGCCGGAA ACCATGACTC CCCCTCCCTT ATTGCAGCAC CACGGGAGCT CTGCAAATAC
CTGAATATCA CCGTCGTCGG TCAGGTGCCG GATGATCCTG AGGAACTTAT CACCATATTG
AAAGACCAGG ACGGGAGACC CGAACTTATC ATCTGTCCGG TCCCGTACCT CCGTGACCGG
GATGTCAGAA CCATGCAGGC AGGGGAGAGT GCCGGAGAGA AGGCGGCAAA CCTTATTGAA
GGGATAAAAG CCCGATATCA TGCAATTGGT TCCTGTGCAG AAAAGATGCG GGAGGAGATG
GGAGATTTCA TCCCGATTAT TGCAACCGGA CATCTGTTTG CTGCAGGAGG CATAACCAGG
GAAGATGACG GCTGTCGTGA CCTGTACCTG GGAACACTCG CCAGTGTCGG GGCTGATGCG
TTTCCTTCCT GCATCGATTA CCTGGCGCTC GGTCACCTGC ACCTTCCCCA GAGAGTATGT
GGGAATGACC GGATGCGATA CAGTGGTGCA CCCCTGCCTA TGGGATTTGG AGAGGCCGGG
CAGACGAAAT CGGTCCTCAT GCTTGATGTG CAGGATTCAC GCAATATGTC GGTGAAAGAG
ATCCCGGTCC CGGTATTTCA ACAATTACGC AGAATATCAG GAGCGTTTGA AGAGGTATTA
AAGGAACTTG GCAGATTGAA GATGGAGTAC TCTCCTGCCC TGGTTGAGGT AATTCTTGAA
GATCCCCGTA TCATTCCAGA CGCGTCGGAG AGGATCCGAA CCACTATTCA GGGATCACCT
GTTGAGGTCC TGAAAGTGAA AGCTCAGCGG ATATCTGCAC AGGCAATGCA ACCTGAACGT
GCTGAAGAGT CCCTGGCCGG GCTTTCTCCT GAAGAGGTAT TTCACAGACG GCTTGATGCT
GCAGAAATCC CGAAGGAAGA ACGTCAGGAA CTTCTTGAAT CATTCCATGA AATCTACTCA
GAACTGCTGG AAGAGGACAC CAATTCGGAG TGA
 
Protein sequence
MKILHTSDWH LGNQICGRKR YDEHEQFLSW LLSLINREGV DILIVAGDIF DTTTPPNRSL 
EQYYQFLARA AGSSCRQIII TAGNHDSPSL IAAPRELCKY LNITVVGQVP DDPEELITIL
KDQDGRPELI ICPVPYLRDR DVRTMQAGES AGEKAANLIE GIKARYHAIG SCAEKMREEM
GDFIPIIATG HLFAAGGITR EDDGCRDLYL GTLASVGADA FPSCIDYLAL GHLHLPQRVC
GNDRMRYSGA PLPMGFGEAG QTKSVLMLDV QDSRNMSVKE IPVPVFQQLR RISGAFEEVL
KELGRLKMEY SPALVEVILE DPRIIPDASE RIRTTIQGSP VEVLKVKAQR ISAQAMQPER
AEESLAGLSP EEVFHRRLDA AEIPKEERQE LLESFHEIYS ELLEEDTNSE