| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2077 |
|---|
| Symbol | |
|---|
| ID | 3923661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2353847 |
|---|
| End bp | 2354791 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637897683 |
|---|
| Product | tetratricopeptide TPR_2 |
|---|
| Protein accession | YP_503503 |
|---|
| Protein GI | 88603325 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0457] FOG: TPR repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGAT TACATACTCT GCTGATGAGA GCAATAATGC TTGTTTGGTG CGGGCTTCTC
CTGGTGATTA TTCCCTCTGC CCTTTGCGAT AACTCGTCAC CACCGGAGAG CATAGACAAG
GGTCTTTTTA CCGGAGTTCT CAATACCCTG ACTACAGGGT ACTCCAGAAG TGATGGAACG
GCAGATGACC TTCTTGCCGA AGGGGAACGT TTCCTTTTAA ATGGATCATT TTCCGAGGCC
ACCAGAGCAT TTGATCAGGT TCTCCAGGCC GATCCGGATT CATCTCCCGG CTGGCTGGGT
CTTGCCCGTG CACAATCAGG TGCAGGAGAA CAAGAGCAGG CCCTCATATC TTTAGAAGAG
TTCCTGTTTC GCCATCCGGA TGAATGGCAG GGGTATCTTC TGCAGGGAAC AATCCAGACA
TCCCTTCAAA AATATCCGGA TGCGGTTGCC AGTTATGAGA AGGCACTCGA GCTGAATACT
ACCGATGCTC TTGCCTGGGC CGGATATGGA GCAGCACTCT ATGGGACAGG TTCGTATGAG
GATGCCCGTG ATGCCTGTCA GCAGAGTCTT TCATTACGTC CTGATTTACC GTCGGCTCAT
TACTGGGAGG GAAAAAGCCT GTTCATGCTT GGCGATGAAA CCGGGGCCTT ATCCAGTCTG
AATCATACGG TATCCATTGA CCCGGGGTTT ATCGAGGCGT ATCTCGTAAT ATCTGATCTG
TATGAAAGAT CAGGAAAAGG GGATGACGCA CTTGTGGTGA TTACAACGGG CCTGATTGCA
AATCCCTCTT CATTCCTGCT CTGGAAGGAG AAGGGACGAC TCCTGGAAGA TTTGAACCGG
AGAACTGAAG CACATCATGC ATATGAGCAG GCACTCAGTC TGAATCCAAA TGATTCTGAA
ATCCGGCAGC GTCTGACCAA TATCTCTGAT GGATCTGAAT TATGA
|
|---|
| Protein sequence | MPGLHTLLMR AIMLVWCGLL LVIIPSALCD NSSPPESIDK GLFTGVLNTL TTGYSRSDGT
ADDLLAEGER FLLNGSFSEA TRAFDQVLQA DPDSSPGWLG LARAQSGAGE QEQALISLEE
FLFRHPDEWQ GYLLQGTIQT SLQKYPDAVA SYEKALELNT TDALAWAGYG AALYGTGSYE
DARDACQQSL SLRPDLPSAH YWEGKSLFML GDETGALSSL NHTVSIDPGF IEAYLVISDL
YERSGKGDDA LVVITTGLIA NPSSFLLWKE KGRLLEDLNR RTEAHHAYEQ ALSLNPNDSE
IRQRLTNISD GSEL
|
|---|
| |