| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2054 |
|---|
| Symbol | |
|---|
| ID | 3923794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2319628 |
|---|
| End bp | 2320404 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637897661 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_503481 |
|---|
| Protein GI | 88603303 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.179486 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAC CCGTGAATTA TCTCCTTCTC CTGCTTTTTG CAGGTTTCCT GATAACGAGC
TGTTGTGGAG CAGCCGGAAA TATTTCCGGG ACCGAAAAAC CTGTGTATAT CGTTGGGATA
GATGCATACT ATCCCCCGTT TACCTATCTG GATGCAAATG GAACACCTGT CGGGTTTGAT
GTCGATTCAG TTCAATGGAT TGCGGATACC ATGAATTTTA AGGTACAGAT AACCCCGGTC
CCATGGGATG ATATTCTCAC TGCTCTTGAA ACCGGAGAGA TAGATCTGAT CTATTCAGGG
TTTGCTATAA CCAATGAGCG AAAGGAGATC TGTGATTTTA CGGTTCCGTA CTGGCAAGTC
AACCAGTCTG TAGCGGTAAA CAATCAGAGC TCCGTAAAGA TTGATGACTT TTACTCAGGA
TTACTTCGGG TCGGTGCTCA GAACAATACC CGGGGAGTTA GCTGGGTGGA ATTGAATCTC
ATCGGAAAGG GGAAGATGGC ACCTAGGTCA CTTGTCAGGT ACGAGGGAAT GAATGAAGCA
TTCGATGAGT TGCAGGCCGG TCGGCTCGAC GCGATAATTG GTGCAAGTTC TTTAATAAAG
GCCAATCTGG ATAGTTGTGA CTGCCATGTG ATCGGCGAGA TTGAGACAGA TGATCACTAT
GGCGTTGCAG TGAAAAATGG CAATTCCGAT CTTCTCGAAA CCATGAACAC GGGAATAGAT
CTCCTGATGC TCTCACCTGA ATGGGAGAGA CTGAAATTGA GATATCTGAT GGAGTAA
|
|---|
| Protein sequence | MSSPVNYLLL LLFAGFLITS CCGAAGNISG TEKPVYIVGI DAYYPPFTYL DANGTPVGFD
VDSVQWIADT MNFKVQITPV PWDDILTALE TGEIDLIYSG FAITNERKEI CDFTVPYWQV
NQSVAVNNQS SVKIDDFYSG LLRVGAQNNT RGVSWVELNL IGKGKMAPRS LVRYEGMNEA
FDELQAGRLD AIIGASSLIK ANLDSCDCHV IGEIETDDHY GVAVKNGNSD LLETMNTGID
LLMLSPEWER LKLRYLME
|
|---|
| |