Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_2021 |
Symbol | |
ID | 3924984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 2275048 |
End bp | 2277108 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637897629 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_503449 |
Protein GI | 88603271 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.463591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA ATTCAGAAAT AATGAAATAT GTGGCAACCA CTTGTCCCTA CTGTGGTGTT GGTTGTACAT TAAACCTGGT TGTTAGTAAT GGTAAGGTCG TTGGTGTTGA GCCAAACCAG AGATCTCCCA TCAATGAAGG AAAACTTTGT CCAAAGGGAG TTACCTGCTG GGAACACATA CACAGCCCTG ACCGTCTGAC CACTCCCTTG ATTAAAAAGG ACGGAAAGTT TATTGAGGCA TCCTGGGATG AGGCACTAGA TCTCGTTGCA AAGAACCTTA AGGTCATCTA CGACAAACAT GGCCCAAAAG GACTTGGATT CCAGACCTCC TGTAGAACCG TCAATGAAGA TTGCTATATA TTCCAGAAGT TCGCACGTGT TGGATTCAAG ACAAACAACG TTGACAATTG TGCCCGGATC TGTCACGGAC CATCTGTTGC AGGTCTTTCA CTCTCCTTTG GTTCTGGTGC AGCAACAAAT GGTTTTGAAG ATGCACTGAA CGCCGATTTA ATTCTCATCT GGGGATCAAA TGCAGTCGAA GCACATCCCC TGGCAGGTCG TCGGATTGCA CAGGCGAAGA AGAAAGGCAT ACAGATTATT GCCGTTGACC CACGGTACAC GATGACTGCC CGTTTGGCCG ACACATATGT GCGGTTTAAT CCATCAACCC ATATCGCCCT TGCAAACTCT ATGATGTACT GGATCATCAA AGAGGGCCTT GAAGATAAAA AATTCATTCA AGATCGTGTC AACGGGTTTG AAGATCTCAA GAAGACGGTT GAGAACTACG CCGATGCAGA AGCAATCCAT GGGGTTCCCC TTGATGTTGT AAAAGATATA GCATTCAGAT ATGCAAAGGC AAAGAATGCA GTTATCATCT ACTGTCTTGG AATCACTGAA CTTACCACAG GTACTGATAA TGTTAGATCC ATGGGTAATC TTGCTCTTCT GACTGGAAAC GTTGGTCGTG AGGGAGTAGG AGTCAACCCA CTTCGTGGTC AGAACAATGT GCAGGGAGCA TGTGACATGG GTGCATACCC GAATGTCTAC TCTGGTTACC AGAAATGTGA AGTTGCAGAA AACCGTGCGA AGATGGAGAA GGCATGGAGT GTGACTAATC TCCCGGACTG GTACGGAGCA ACCCTCACAG AACAGATCAA CCAGTGCGGC GATGAGATCA AGGGAATGTA TATCCTCGGT CTGAACCCCG TTGTAACCTA TCCAAGTTCT AACCATGTTA AAGCACAGTT GGAAAAGCTT GACTTCCTCG TTGTACAAGA TATATTTTTC ACGGAAACCT GTCAATATGC AGATGTCATA CTTCCAGGAG CCTGTTTTGC AGAGAAAGAC GGAACCTTCA CCAGTGGAGA ACGCCGTATT AACCGGGTCA GAAAAGCAGT CAATCCACCA GGTCAGGCAA AAGAAGATAT TCACATCATC TCTGAACTCG CTGCAAAGAT GGGCTTTAAA GGTTTTGAAC TTCCGACTGC AAAGGATGTA TGGGATGACA TGCGGGCGGT AACTCCGTCC ATGTTCGGAG CAACCTACGA AAAACTTGAG AGGCCTGAAG GGATCTGCTG GCCATGTCCA ACAGAGGAGC ACCCGGGAAC CCCAATTCTG CATCGGGAAA AGTTTGCTAC TGCAGACGGC AAGGGTAATC TCTTTGGAAT TGATTACCGG CCGCCAGCAG AAGTTGCTGA CGCTGAGTAT CCGTTCACCC TCATGACCGG ACGGCTTATC TTCCACTATC ATTCCAGAAC CCAGACGGAT CGTGCTGCAG ACCTGCACCG CGAGGTTCCT GAATCATATG CCCAGATCAA TATTGAGGAT GCACGTCGTC TTGGTATTAA GAACAATGAG TACATCAAGC TGAAAAGCCG CCGTGGAGAG ACCACAACAC TCGCACGTGT CACCGATGAA GTCGCTCCAG GTGTTGTGTA CATGACCATG CATTTTGCTG ATGGTGTCAA CAACCTGACC AATACCGTTC TTGATCCAAT GTCCAAGATG CCGGAGCTCA AGCATTGTGC CATATCAATT GAAAAGGTTG GAGGGAACTA A
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Protein sequence | MSENSEIMKY VATTCPYCGV GCTLNLVVSN GKVVGVEPNQ RSPINEGKLC PKGVTCWEHI HSPDRLTTPL IKKDGKFIEA SWDEALDLVA KNLKVIYDKH GPKGLGFQTS CRTVNEDCYI FQKFARVGFK TNNVDNCARI CHGPSVAGLS LSFGSGAATN GFEDALNADL ILIWGSNAVE AHPLAGRRIA QAKKKGIQII AVDPRYTMTA RLADTYVRFN PSTHIALANS MMYWIIKEGL EDKKFIQDRV NGFEDLKKTV ENYADAEAIH GVPLDVVKDI AFRYAKAKNA VIIYCLGITE LTTGTDNVRS MGNLALLTGN VGREGVGVNP LRGQNNVQGA CDMGAYPNVY SGYQKCEVAE NRAKMEKAWS VTNLPDWYGA TLTEQINQCG DEIKGMYILG LNPVVTYPSS NHVKAQLEKL DFLVVQDIFF TETCQYADVI LPGACFAEKD GTFTSGERRI NRVRKAVNPP GQAKEDIHII SELAAKMGFK GFELPTAKDV WDDMRAVTPS MFGATYEKLE RPEGICWPCP TEEHPGTPIL HREKFATADG KGNLFGIDYR PPAEVADAEY PFTLMTGRLI FHYHSRTQTD RAADLHREVP ESYAQINIED ARRLGIKNNE YIKLKSRRGE TTTLARVTDE VAPGVVYMTM HFADGVNNLT NTVLDPMSKM PELKHCAISI EKVGGN
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