Gene Mhun_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2016 
Symbol 
ID3924979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2269866 
End bp2270717 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content45% 
IMG OID637897624 
Productmethyltransferase 
Protein accessionYP_503444 
Protein GI88603266 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATG TTAATACAAT TGATTGGAAT GAGGCCTGGA AGAAACCTGA AGGTGAGGAG 
GGAAAAAAGA AGGGTTTTAT CAGTTGTGGG AGACGATGGT CAGATCCTGA TCGATGCAAA
CGGTTTAACG ATGTCATGAA AGAAGATAAC TGGGCAGGAT CCAGGGCACG GGTCTCTGCA
ATGGACATAG ATGAGAGTTA TCGGATTCTT GATGTCGGTG CCGGACCTGG AACTCTGGTT
ATCCCTCTTG CATCCATTGT TGCACATGTC ACAGCTGTTG AGCCTTCAGA GGGGATGCTT
TCCTGTCTTC GTGAAAATAT TGCTCTTGCA GCTATTACCA ACGTGGATAT TGTCCCGAAA
AAATGGGAAG AGGTGGACGT CAAACAAGAT TTAAATCCAC CATATGATGT TGTTGTTGCG
TCATACTCGC TGGGTTTTCC GGATCTCCGG GAAGGAATCC TGAAAATGGT GGCTGCCTCA
TCCCGATATG TCTATATTTT CTGGTTTGCA GATATGCTCT CTCCCTGGCA GAGAAATTAT
GGAGAAATCT GGGAGAAATT ATATGGGATT CCCCGGCCTT CAGGGAATAA GCCTAACATC
ATCTACAATC TTCTTCACCA AATGGGAATT TATGCCAATA TTGATATCAG CAAAGAGGAG
AGTATTCACC GATATTCAAG TATTGAGGAA GCAGTCGCTG ATCAAAAAGA GGGGCTACAC
CTCACAACTT CGGAACAGGA AGATATCCTT CGCGACTACC TGGGTAAAAA ACTCATTCGG
GAGAATGGAA AGGTCGTCCT TCGTGAGATG ACGCACCGGG CAAAGATCTG GTGGAATGTA
AATGACCAAT GA
 
Protein sequence
MIDVNTIDWN EAWKKPEGEE GKKKGFISCG RRWSDPDRCK RFNDVMKEDN WAGSRARVSA 
MDIDESYRIL DVGAGPGTLV IPLASIVAHV TAVEPSEGML SCLRENIALA AITNVDIVPK
KWEEVDVKQD LNPPYDVVVA SYSLGFPDLR EGILKMVAAS SRYVYIFWFA DMLSPWQRNY
GEIWEKLYGI PRPSGNKPNI IYNLLHQMGI YANIDISKEE SIHRYSSIEE AVADQKEGLH
LTTSEQEDIL RDYLGKKLIR ENGKVVLREM THRAKIWWNV NDQ