| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1975 |
|---|
| Symbol | |
|---|
| ID | 3924542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2227167 |
|---|
| End bp | 2229023 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637897584 |
|---|
| Product | molybdopterin binding domain-containing protein |
|---|
| Protein accession | YP_503404 |
|---|
| Protein GI | 88603226 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0303] Molybdopterin biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.662669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGTT TTTTAACGCT CATCCCGTAC CTTGCTGCAC AAAGAATTCT GAAGACGTCT
GCGAAACCTA GATACCTGAT CAGAACGATT CAGGTTACAA AAAGTCATGG CCATATCTGC
CATGAACCAG TATACTCCAG GCTTACAGTC CCGAATAGTG CAGTATCCAA AAGGGATGGG
TATGTAATTA ATGCCTCTGA TACATTCAAT GCATCGGATT CTGACCCGGT ACAACTGAGT
GTATTTGATC AGGTTCATAC CGGGTCACCG ATACCGGAAG GATTTGATGC CGTAGTTATG
CATGAGGATA TCAGAGAGGA TGTCAATGGC AACATAACCA TACTAAAACC AGCACGACCA
GGGCAGAATA TTCAAAAAGC AGGAAGTGAA ATCAAGACCG GAGAAATGAT TATTCCTGCA
GATCACGTGA TTTCTCCTGA GGATATTGGA GCGATGATTG GATATGGGAT TACATCGGTG
CAGGTTAAAA AAATTGTTGT GGGACTAATC CCAACGGGAG ATGAATTAAA AGAACCCTGT
ACAGCACCAG GCCCTGGTGA GGTGATTGCA AGCAATTGTG AGATGTTAGC AGCCTCTCTT
GTAACTATTG GTATAGAAAC ATTTATCTAT CCCATAATAC CCGATGATCC AAAAAAAATA
CGGGATACAG TGGAAGAAGC CGTCGGGGAA TGTTCCTTTG TTATCATATC AGGTGGGTCT
TCAACAGGAT GTCGTGATCA TACGAAAGAT GTGTTGACCG CGATAGGAAC AATTCTGTAT
CATGGAGTTG CCATGCGGCC TGGAAAAACC ACACTCGCAG CGATTGTTCA GGATATTCCT
GTCTTTGGAG TCCCCGGAAC TCCAGCAGGA GCTCTTGCAG TCCTCCGCGG ACTGATTATC
CCCTGGCTTT CAGATATCGG ATATCCTGTA CCAATCCACC ATTCCATACC GGTTACTCTG
GCAGATTCTG TACCGAGTGA GCTGGGTACC GATGATTTTG TTCTGATGGT CGTAGGAAAG
GTAGGTGATG AGTATAAAGC AATGATGGTT CCTCGCGAAG GTGGCCAGAT CTCAGCAGTG
AAATCTAATG CAGTCCTGCA TATTGCCCGA AATAGTGAGG GAATAGGAAA GGGAAAAAAA
AGCCTGGTTC ATATGACAAG ATGTTCTCCT CCACCTGACA ATATCTATCT ATTCTACGGG
ATGTATGATC CTATCCTTGA CGTTCTTGAC CAGTACCTCA GAAAGCTCAA TAAGAGAATC
TATGTTCGTG AGGCATCATT GGAATCCACC CTTCTTTCCA TGCAAAAGAA TACGGTTCAT
GGTGGCATAA TTATCCGCCC CAGAAATAAC GGACTGAATG TATTGGAACA TGGATATACC
AACACTCATC AAAAATTATG TACAATTACT GTTGCTGACC GTGAATATAT TCTGGCTGCT
TCTGTATTTC CAAATTATGA CTCATTAAAA GAATTTGCCT TTCCAAAAAT CCCGGATCAT
TCATTTCTTT ATGAAATTCA GGAACAGTTT ATTCTCAATC ATCAGATAAA TCCGTTGCTC
ATTGAAAGGA TTGAACCTGA ATGTAAAACC GAACTTGAGA TAGTGCAACA GATAATACAG
GAAAAGATTG ATTTCGGGCC CTGCTCAGCA TCGCTGGCAT CTGAATATGA TCTTTTTGGA
CCAGTAATTG GAAGTGAACG GATTGATCTT ATCGTTAAGC AGGATGATGC ACAATCAGAA
CAAATTAACG CGTTACAGGA GATACTATCA TCTGAAGAAT GGAGAAGTGA AAGTGGGCAT
TTACAGGGAT ATAATCTGAA AAGAAGCGGG CAAATATGTT GTCTGAAAGA GCACTGA
|
|---|
| Protein sequence | MSRFLTLIPY LAAQRILKTS AKPRYLIRTI QVTKSHGHIC HEPVYSRLTV PNSAVSKRDG
YVINASDTFN ASDSDPVQLS VFDQVHTGSP IPEGFDAVVM HEDIREDVNG NITILKPARP
GQNIQKAGSE IKTGEMIIPA DHVISPEDIG AMIGYGITSV QVKKIVVGLI PTGDELKEPC
TAPGPGEVIA SNCEMLAASL VTIGIETFIY PIIPDDPKKI RDTVEEAVGE CSFVIISGGS
STGCRDHTKD VLTAIGTILY HGVAMRPGKT TLAAIVQDIP VFGVPGTPAG ALAVLRGLII
PWLSDIGYPV PIHHSIPVTL ADSVPSELGT DDFVLMVVGK VGDEYKAMMV PREGGQISAV
KSNAVLHIAR NSEGIGKGKK SLVHMTRCSP PPDNIYLFYG MYDPILDVLD QYLRKLNKRI
YVREASLEST LLSMQKNTVH GGIIIRPRNN GLNVLEHGYT NTHQKLCTIT VADREYILAA
SVFPNYDSLK EFAFPKIPDH SFLYEIQEQF ILNHQINPLL IERIEPECKT ELEIVQQIIQ
EKIDFGPCSA SLASEYDLFG PVIGSERIDL IVKQDDAQSE QINALQEILS SEEWRSESGH
LQGYNLKRSG QICCLKEH
|
|---|
| |