Gene Mhun_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1963 
Symbol 
ID3924530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2213375 
End bp2215303 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content45% 
IMG OID637897572 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_503392 
Protein GI88603214 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.743491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGT CAGGAAATAA AGAGTTCCAA TATGGTCAAT ATTCGTTGTC GTACCATATT 
ATGCTCATCT TCCTGGTCAT AGGGATCATT TGTACAAGCA TCATCTTCGC CTATCTCTAT
CATGTTGAAT CTGATTCAAT AGAGTCTGAA TTTTTACTTT CCCAACGATA TGGGGAGGAA
GCCCTTACTC ATGCGATCCA GCTGGCAGAT CAGAGCCTCT CTTTTTATGA TAATGCATAT
AATCAACCTC TTCGTCTGGC GCTGCTCGAT TATCAAAACC TCTTCCATCA AAACGGGAAG
AGTCCTGAAG AGTTGGATTT AGAGGAAATA AAGGAGAAAC TGGCGGATTA TTTTGATCTC
CCCATCGACC TCTATATCTT TAATTCTTCA GGAGTGATCA TTGCCTCAAC CTTTCAGCCA
GATATTGGGC TTGACTTCTC ATTTGCGCCG AAATTCAAAG AAAGACTGAA TACCATCCGG
CTTGGAGACT CTGTCGCATT TGATGCCATC GTAACTGGGA CAAAACTAGG AGAAGAACGA
AAATATGCAT ATATCCCGAC CCGGGATCAT GAGTATATTC TGGAGATTGG GATAAATCTC
CAGGTGTTCT TCGAAAAACA GGGGATATCC AAGTATCCAC GTCTTGCCCG CTGGTATAAA
GAGACGAGGC AGGATATTGT ATCAGTATGG ATATTTGACC AGACCTTCAA TCAGGCTACC
GATATCCGGA CTTCCATCCC CGGGTTTGCG GTGTACCCAT ATGAATTTCA GGACCGGACA
GATCGTTTTG ACAACCTGAA AACGGTCTTT GGAGAAAAAA AGAGCATTGT CGTTACCGGG
CCACAACCAA ACCAGATTAC GAAATATCTC TATATCCCAC AGGTGAAAAG TTCCTCAGTA
TCATCTGGCC TGTTCGACAA AGTGGCCGAG ATCGTCTACT CGACCGAACA GGTACGACAG
AAGAAAGAAA AGGCATTGGT AAAGAATATC CTCAATGCCC TGATGATCAT AGCATTTTTA
TGTCTCATCG CATTTTTCAT ATCACGGTAT GTAACCCGGC CGGTTTACCA GATAATTGAG
GATATTGAGA TCATCGCAGA TGGAGATTAC GATCACCCGA TCCGTCGGAC AAAGGGGTTT
GAGTTTCGAA GACTGGAAGC GAGTATCCAG AAGATGGTGG GACGGCTGAA AGAGGATATC
ATCTCAATCA GGCAGAAGAC GGATGATCTG AATGATGAGC TACAAAACCG GCGATATGCA
GAGGAGTCTC TTCGGGCAGC AAATCATAAA TTATCTCTGC TTGGAACCAT TACCAGGCAT
GATCTGCTGA ATCAGATGTC TGTGGTCTCA TCAGGATTTG ACCTTCTTGA GGACGAGATT
CCGGTAAATG AACAGAATAA TCGGTTAAAA GCCATGATTC GTGATGCTCT GAATTCCATC
AGTGATTTGA TCCTCTTTAC CCGGATATAT GAGCAGATGG GGGTTGACAA ACCGGTCTGG
CATTCCATAA GCCGGCTAAT AAACGAGACG ATGAAAAATT TCAGTGATCA GCCCTTAACC
GTTCATGATC TGACGAACGG TCTTCTGGTA TGTGCTGACC CAATGTTTGA CCGTGTCATC
TATAACCTTA TAGAAAATTC GCTCCGTCAT GGCGGGAGGG TAAGCCGGAT CTCCTGTGAT
GTGAGGATTG ATGATACGTT TGCCATGCTC ACCTATTCAG ATGACGGATC AGGGGTCCCT
GCAGCTGATA AAGAGAAGAT CTTCGCAAGA GGATATGGGA AAAATACCGG TCTTGGACTC
TTTCTCACAC GGGAGATCCT CTCCCTTACC GGTATAGAGA TACGGGAGAT TGGAACTTTA
GGGGAAGGTG CATGTTTTGA GATGAAAATT CCACAGGGAA AATGGCGGTT TGAGGATGCC
GGTTTGTAA
 
Protein sequence
MSRSGNKEFQ YGQYSLSYHI MLIFLVIGII CTSIIFAYLY HVESDSIESE FLLSQRYGEE 
ALTHAIQLAD QSLSFYDNAY NQPLRLALLD YQNLFHQNGK SPEELDLEEI KEKLADYFDL
PIDLYIFNSS GVIIASTFQP DIGLDFSFAP KFKERLNTIR LGDSVAFDAI VTGTKLGEER
KYAYIPTRDH EYILEIGINL QVFFEKQGIS KYPRLARWYK ETRQDIVSVW IFDQTFNQAT
DIRTSIPGFA VYPYEFQDRT DRFDNLKTVF GEKKSIVVTG PQPNQITKYL YIPQVKSSSV
SSGLFDKVAE IVYSTEQVRQ KKEKALVKNI LNALMIIAFL CLIAFFISRY VTRPVYQIIE
DIEIIADGDY DHPIRRTKGF EFRRLEASIQ KMVGRLKEDI ISIRQKTDDL NDELQNRRYA
EESLRAANHK LSLLGTITRH DLLNQMSVVS SGFDLLEDEI PVNEQNNRLK AMIRDALNSI
SDLILFTRIY EQMGVDKPVW HSISRLINET MKNFSDQPLT VHDLTNGLLV CADPMFDRVI
YNLIENSLRH GGRVSRISCD VRIDDTFAML TYSDDGSGVP AADKEKIFAR GYGKNTGLGL
FLTREILSLT GIEIREIGTL GEGACFEMKI PQGKWRFEDA GL