Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1958 |
Symbol | |
ID | 3924260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 2204637 |
End bp | 2206433 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637897567 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_503387 |
Protein GI | 88603209 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.293409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGAA AACGTAACTG CTATCAAAAA ATGAAAATTT TTCTTTTTTC CTCACACGTT CGCTCTCATC TCATACTGGT ACTTTTCATT GTTCTGAGTG GGATTGGAAT TTGTGGAGTC AATGCTGATC CATCATATGA TACTGCTCTT TCTCTGATTC CTGAAGAACT GGAATGGATC TCTGCTCATC CTGTTATCAG GATCTGCCCT GACCCCCATT ATCCCCCGTT TGAAATGCTC ACGTCTGATG GCGGGTATCA GGGAATATCT GCCGATCTCC TCAGGATCAT CGCCGAACGT GCCGGACTTA CCCTTGAGGT CGTGCCATGT GAGAACTGGA GCCAGTGTAT AGAGAAAATT CGGAATCGAG AGGTCGATAT CCTTGGTGCT GTGTTTATTT CAGACCTTCG CTCAGGGTAT CTCTCTTATA CTGATCCCTT TTACTCGTCT CCACTTGAGA TCATCACCAA AAACACCGCC CCTTCCGATC TAACGCTGGC CGATCTCTCC GGAAAGTCAG TTGCAGTCGT GGATGGATAT ACATCACATC TCCTCCTGGT GACACATTAT CCAGATATTC ATACCGTTGT TGTTCCTGAT GTCCCATCCG GACTTGAAAA GGTCGTGTTC GGCTCTGCTG ATGCGTTTCT TGGTGATCTG GCAACCGCAG CCTATCATAC GGAAAAGTCA GGGTTTACCA ATCTCCAGAT ATCAGGGGAG GGTTCTTTTG CGAATAATAC CCTGCAGAGC CTTGCCTTTG GGATTCGAAG TGATCAACCG GTTCTTGTAT CAATACTCAA TAAAGGGCTG CATACTCTCT CTGATGCAGA AAAGAAACGC ATATTCTCCA CCTGGATACC TGCATCACTC GTCCCGCCCC TGATAAGCCG GGAGATTCTC ATTGCAGCAG GGGGGATCAT TGCCTTTTTC TGCATCATCA TCGTTGGGTT TTATGTCTGG AACAGGTCTC TTCAGATGGC GGTCGACGAG AAGACCAGGC AGCTTGTGGC AGAGCTCGAT GAGCGGAAAA AGATTCAGAA TGAACTCCAG AATAAAAATG ATGAACTATC CGCGGCATAT GAAGAGATTA CCGCGACGCA GTATGAACTA AAGCAACAGT ATCTGCAGCT GATGCAGAAC CAGGAGGAAC TCAGGCAGCA GGAACGTACG TTAAGGCAGA TCCGGTTCTC TATTGATCAG AGCCATGATA TGATGTTCTG GCTTGATATG ACAGGTAAAA TTCGTGATGT CAGCGGAAGT GTCCACTCTG TTCTTGGATA TTCACATGAG GATCTTGAAT CTTTGGATAT TTCGGCGATA GATCCAAAAT TTACGATAGA TTCAGGACTT GAAGTCTCCG GATTGGAACA CCCTGTCCCG GTCAGATATG AGACAGAATT TATAACAAAA AGCGGAAAAT CGCTCATGGT TGAAGTATCG CTTATCTCCT ATGAATATGC TGACGAGACC ATGATTCTAT TATCAGCCCG TGATATCAGT GAACGGAAGA TGATGGAAGA CCTGAAGAAA AAGGCATTCA CGCAGATTGA TAAAAATATC GAGCAGTTTG CAATCTTAAA CGATCAGATA CGAAATCCGC TCACGCTCCT CATGATTTAC GCAGAAGAGA TGGGTACAAA GGACGAAGCA AAAATCATGG AACAGATATC CAGGATTGAT CAGCTGGTTG ATAAACTGGA TAAGGGGCTT TTAGAATCAG AAAAGGTCCG GGGGTTTCTC CGGAGATATT ATGAACACAC ATCTGATACC CGGGAACCAC TTGAGGATAC CTGGTAA
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Protein sequence | MIGKRNCYQK MKIFLFSSHV RSHLILVLFI VLSGIGICGV NADPSYDTAL SLIPEELEWI SAHPVIRICP DPHYPPFEML TSDGGYQGIS ADLLRIIAER AGLTLEVVPC ENWSQCIEKI RNREVDILGA VFISDLRSGY LSYTDPFYSS PLEIITKNTA PSDLTLADLS GKSVAVVDGY TSHLLLVTHY PDIHTVVVPD VPSGLEKVVF GSADAFLGDL ATAAYHTEKS GFTNLQISGE GSFANNTLQS LAFGIRSDQP VLVSILNKGL HTLSDAEKKR IFSTWIPASL VPPLISREIL IAAGGIIAFF CIIIVGFYVW NRSLQMAVDE KTRQLVAELD ERKKIQNELQ NKNDELSAAY EEITATQYEL KQQYLQLMQN QEELRQQERT LRQIRFSIDQ SHDMMFWLDM TGKIRDVSGS VHSVLGYSHE DLESLDISAI DPKFTIDSGL EVSGLEHPVP VRYETEFITK SGKSLMVEVS LISYEYADET MILLSARDIS ERKMMEDLKK KAFTQIDKNI EQFAILNDQI RNPLTLLMIY AEEMGTKDEA KIMEQISRID QLVDKLDKGL LESEKVRGFL RRYYEHTSDT REPLEDTW
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