Gene Mhun_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1942 
Symbol 
ID3924296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2183170 
End bp2184441 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content49% 
IMG OID637897552 
Productbeta-lactamase-like 
Protein accessionYP_503372 
Protein GI88603194 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCTG ATATGGCTGT AGATCCGGAT GAGAGCCGGT TCGATGAGGG GATATCGCTT 
ATTAAAGCGG GAAAGATAGA AGAAGCGATT GATATCTTTT CTGAACTGGT AGAGAAGGAT
GATCGGAATC ATAAAGCCTG GAATGCGTAT GGGGTGGCTT TATCCCAGAC AATCCATAAA
GAGAGTGCAA TTCATTGTTT TGAAAATGCC CTGCAGTTGG ATCCTGATAA CAAAATCTAT
CAGCGAAATC TGAACAGAAC AAAAAATCCC CCTTCAAAGA AAACTATCAG AAAAAAGGCT
GAACTGACAC CTCATAAGTC CGGGAAAAGA TGGATAGCCC CTGCTGTTCT CCTCCTTCTG
GCGGGAGTGG CAGTATTAAT CGTATCCGGT CTGGTGCCGG GAGTCTCGGT CTCAGATCAG
GTACGCAGTC TTATTCCTGG ATCAGGGCCG GTTGAGGAGG TCCCGGTCAT TACACCAGAA
CCGGTCATCA CTCCTGAAGT CACACCCGAA CCAACTCCTG AACCGACACC GGTTCCTACA
CCCCTGCCTG AACCTGAAAC CCTGTTCCAT TTCATTGATG TCAGTCAGGG TGATGCAGCC
CTGATACAGA GCGAAGGCAA AAACATGCTC ATTGATGCCG GTCCGAAGAG CTCAGGTCCG
CGCCTTGTTG AGTATCTGAA ACGTCAGAAT GTGACCTCCC TGGATTACGT TGTCGCGTCT
CACCCGTTTG ATGATCATAT CGGCGGGATG GTTGATGTTC TCAAGGCCTT TGAAGTCAGG
ACGTATGTGG ATAACGGAAT GACACATACA TCTGACCTGT ACAAAGACGT CATAAATGCC
GTAATATCAG ATCAGGCGGT CAGGATGATC GTCACTGCAG GTATGAATAT TCCCTTTACC
AATACGACAA AAGTGGATAT TATCGGGCCG CACCGTCTGA CCGGTCACCA GGATACAGAC
TCGCTGGTCC TCCGGGTCAC CATGAATAAT GTCTCCGTCA TCTTTCCCGG TGATTCATCA
GAAGTTCGAG GGCCTGCAAC CATACTAAAA CTCCCTGACC ATGGATCAGA TGCAGGAATC
GGTCCTATTA TGAATACCAG ACCTGAAGCG GTTGTCATCT CGCTGGCATC GGGCAATCCG
TTCGGATATC CCCGGTCTGC AACCCTTACT GAGATTATGA AACAGGGTGC ACAGGTATTC
AGAACGGATG TAAATGGGAC CATCGTTATC AGGACCAATG GCGAAAACTG GACCGCAAAA
ACGGTACGCT GA
 
Protein sequence
MHADMAVDPD ESRFDEGISL IKAGKIEEAI DIFSELVEKD DRNHKAWNAY GVALSQTIHK 
ESAIHCFENA LQLDPDNKIY QRNLNRTKNP PSKKTIRKKA ELTPHKSGKR WIAPAVLLLL
AGVAVLIVSG LVPGVSVSDQ VRSLIPGSGP VEEVPVITPE PVITPEVTPE PTPEPTPVPT
PLPEPETLFH FIDVSQGDAA LIQSEGKNML IDAGPKSSGP RLVEYLKRQN VTSLDYVVAS
HPFDDHIGGM VDVLKAFEVR TYVDNGMTHT SDLYKDVINA VISDQAVRMI VTAGMNIPFT
NTTKVDIIGP HRLTGHQDTD SLVLRVTMNN VSVIFPGDSS EVRGPATILK LPDHGSDAGI
GPIMNTRPEA VVISLASGNP FGYPRSATLT EIMKQGAQVF RTDVNGTIVI RTNGENWTAK
TVR