| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1940 |
|---|
| Symbol | |
|---|
| ID | 3924294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2181617 |
|---|
| End bp | 2182426 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637897550 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_503370 |
|---|
| Protein GI | 88603192 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCT TCATCGTAAT TATTATCATA CTTCTGCTCT GTGGCCTTGT CGCCGGATTT
CTCGCCGGTC TTTTTGGTAT CGGGGGAGGG GTCGTGATGG TCCCGGTCAT GTTTTTTCTC
TTAAATGACC TTGGGTATGA TGATAATGCC ATGGCTATTG CTGTGGCCAC CTCTGCCGCC
GTTATTCTGC CGACTGCAGT CGCAGGAGCG ATAAAAAATT TCAGCGGGAA ACAGATCACC
TGGTGGCCGG CCCTCATTCT GGGCTTCGGA GGAATACTCG GGTCGATGGC AGGAAGCACC
CTCTCGGTTC TCATTCCTAG TCAGGTTCAT ATCCTTGCAT TCTCCGGCTT TTTGATCTTC
ATGGCTGTGT GGATGATCAT CAAACAATGC AGATATCTGT GTGCATATGC CGTCAGGGAG
ACTGATTTCA TCCTCCTCAT CCTCGGCATT GGTGTGGGAG TTGCATCCGG GCTCTTTGGG
ATTGGTGGCG GCGTAATTCT GACACCGGTA CTGACATCAA TTCTGGGAAT GAATATCCAC
AAATCCATAG GTATCTCGCT TACCGCCATG GTCCTTATTG CGTCAGGAAC GGTGGTCTCC
TATATCGTTC TTGGATGGGG AGTGACCGGT CTTTTTCCCT TCTCTATCGG GTATGTAAAC
CTCCTGTTTG TCCTGGTCCT GGTCCTTACC TCAATTCCTG CTGTCAGGTT TGGGGTGAAG
ACAGGGAGCA CCATGTCAGA GAAGAAGTTA CAGGTACTTT TTATCGGAAT GCTTATCCTG
CTGGCGATTC GGATGGCAAT ATCAGCCTGA
|
|---|
| Protein sequence | MEFFIVIIII LLLCGLVAGF LAGLFGIGGG VVMVPVMFFL LNDLGYDDNA MAIAVATSAA
VILPTAVAGA IKNFSGKQIT WWPALILGFG GILGSMAGST LSVLIPSQVH ILAFSGFLIF
MAVWMIIKQC RYLCAYAVRE TDFILLILGI GVGVASGLFG IGGGVILTPV LTSILGMNIH
KSIGISLTAM VLIASGTVVS YIVLGWGVTG LFPFSIGYVN LLFVLVLVLT SIPAVRFGVK
TGSTMSEKKL QVLFIGMLIL LAIRMAISA
|
|---|
| |