| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1928 |
|---|
| Symbol | |
|---|
| ID | 3924125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2169548 |
|---|
| End bp | 2170522 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637897538 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_503358 |
|---|
| Protein GI | 88603180 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | [TIGR02371] alanine dehydrogenase, Archaeoglobus fulgidus type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTACT ATCCGGCGCC AGAAGAGGTG ATAGAGATGA GTGATCTGAT AGCTGCAGTT
GAATCTGCAT TTATTGATCA CGGTGCGGGA AGGAGCATTA TGCCCCCGAA GGTCTATGTA
AATCTTCCGG GGGGTGATTT CAGAACAATG CCATCATATA TTCCATCCCT TCAGACAGCC
GGGGTAAAGA TTGTGAATGT CCACCCCGAA AACAGGAAGG CAGGTCTGCC AACCGTGATG
GCGGTCACGA TACTTCTGGA CCCCCCGACC GGAATGCCTG TTGCAGTTCT GAATGCAACC
ACACTCACTG ACCTTCGGAC CGGAGCTTCT GCAGCTGTTG CAACCAGGGC TCTGGCTCAC
AAAACATCCG GGACCCTTGG GATTATTGGA TCAGGCAGGC AGGCTGATTC CGGTCTTCTG
GCCCTCTCCC ATGTCTTTGA ACCGGAAGAA GTGCTGGTAT GGTCCAGGTC AGCCTCTCAT
GCAGAGAAGT TTGCACAGCG GTATTCTCAT CTCCCTATAC GACCCACCGA TATTGAAACC
GCTGCAGGGG CCGATGTCCT TCTGACCGTA ACCCCTTCGA AAATCCCGAT CATTCTGGAT
GAGTGGATCT CTGACGGGGC TCATATCAAT GCCATGGGGG CCGATGCTCC AGGAAAACAG
GAACTTGATC CCGCAATACT AAAAAGAGCG GATGTGTTCG TGGATGACAT GGACCAGGCC
ATCCATTCCG GAGAGGTGAA TGTGCCAATC AGTGAGGGGA TATATACCCC CTCGCAGATA
ACCGGAACGC TTGGGAAGGT GCTGACCGGG TCGATCCCAA AACCCTCCCC TGGCACAGTC
ACGGTTTTTG ACTCAACCGG GCTGTCTATT ACCGATCTTG CAGCAGCCCA CCTCGCAATA
GGAAAGGGAA GAACCATTGA CCTGCCATTT ATGCAGAATG CCGTAACACC GGGCATTATC
GGAGTGAGAG AATGA
|
|---|
| Protein sequence | MQYYPAPEEV IEMSDLIAAV ESAFIDHGAG RSIMPPKVYV NLPGGDFRTM PSYIPSLQTA
GVKIVNVHPE NRKAGLPTVM AVTILLDPPT GMPVAVLNAT TLTDLRTGAS AAVATRALAH
KTSGTLGIIG SGRQADSGLL ALSHVFEPEE VLVWSRSASH AEKFAQRYSH LPIRPTDIET
AAGADVLLTV TPSKIPIILD EWISDGAHIN AMGADAPGKQ ELDPAILKRA DVFVDDMDQA
IHSGEVNVPI SEGIYTPSQI TGTLGKVLTG SIPKPSPGTV TVFDSTGLSI TDLAAAHLAI
GKGRTIDLPF MQNAVTPGII GVRE
|
|---|
| |