Gene Mhun_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1922 
Symbol 
ID3924119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2163820 
End bp2164248 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content47% 
IMG OID637897532 
Producttetratricopeptide TPR_2 
Protein accessionYP_503352 
Protein GI88603174 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGCT GGCACTTTTT TGGGACAGTG GTCATGGAAC CAGGAGAAGA GGGATTGACA 
ATGGCAATAG ATGCTATCGT ATCACAAGAA AGGACGTTTA CGAAACTGAA TCCAAATATC
GAGTGTGCTC TTCGTGATGC ACAGAACTGT AAGATGGCAG GGGATTATCA GCTTGCCCTG
AACCTGTATG ACAAGGTTAT TAAGGAAGAT CCGGCAAATG TTCGGGCATT ACATTCAAAA
GCGAATGTTC TGGACCTGAT GGGGAATTAT TCTGAGGCGA TCAGGTGTTA TGAATCCGCT
CTTGAGTGCG ATCCCCACAA TGCTGAGGCA TGGTATAATA AGGGAATGAC CCTCCGGAAG
ACAGGCAGGC ATGAAGAGGG TCTTGAACAT ATCAGAAAGG GCATCTCCCT GGCCATGGGA
GATATCTGA
 
Protein sequence
MCGWHFFGTV VMEPGEEGLT MAIDAIVSQE RTFTKLNPNI ECALRDAQNC KMAGDYQLAL 
NLYDKVIKED PANVRALHSK ANVLDLMGNY SEAIRCYESA LECDPHNAEA WYNKGMTLRK
TGRHEEGLEH IRKGISLAMG DI