Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1900 |
Symbol | |
ID | 3923432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 2145386 |
End bp | 2146093 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637897513 |
Product | putative transcriptional regulator |
Protein accession | YP_503333 |
Protein GI | 88603155 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGAAG CAATCTTTAA CTTCTTAGAA ATAAAAAGGA AGGATGTCTG GAGTATTCCG CTCACGATGC TTCAGGAGGT CATCATCAAT GCTCTTGTCC ATGCAGATTA TTCACAGATA GGAGTACCGA TACGGTTGTC ATTCTTTGAT GACCGGATTG AGGTGGAAAA TCCCGGCATT CTCCTCCCTG GTATGACGAT TGAGGATGTG AAGTCCGGGG TGTCGAAGAT CCGGAACCGG GTGATTGCCC GGGTGTTTCG GGAGTTAGAT CTGATTGAAC AGTGGGGGAG CGGGTTTCGC CGGATACTTC AAGAGGCTTC GGATTTGGAG CTTACCGAAC CGGTGATCGA GGAGATCGGG ATGCGGGTCC GGGTGAGAGT TTTTCTCTCT GAAGAACTGG TGATTCATAC CGAGGGACTA AGTAGGGACC AAGTTGGGAC CAAGTCGGGA CTCAGTCCTT CCGGCAGGGA CCAGGTTGAT CTGAATGATG AGCAGCGAAT GGTCTTGCAG AAATGCATTC AGGAGTCCGG AATTACAGAC CTGATGGCGG TGGTACAGAG AACCAACCGG AGTACGTTCA GAGAAGCGGT GATCAATCCG TTGCTGGATA AGGAGCTGCT GGAGATGACG ATACCAGATA AACCAAACAG CAGTAAGCAG AAGTACCGGA TTACCCCGAA AGGAAAGGAT CTTCTGGCAA TTATATGA
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Protein sequence | MHEAIFNFLE IKRKDVWSIP LTMLQEVIIN ALVHADYSQI GVPIRLSFFD DRIEVENPGI LLPGMTIEDV KSGVSKIRNR VIARVFRELD LIEQWGSGFR RILQEASDLE LTEPVIEEIG MRVRVRVFLS EELVIHTEGL SRDQVGTKSG LSPSGRDQVD LNDEQRMVLQ KCIQESGITD LMAVVQRTNR STFREAVINP LLDKELLEMT IPDKPNSSKQ KYRITPKGKD LLAII
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