Gene Mhun_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1900 
Symbol 
ID3923432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2145386 
End bp2146093 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID637897513 
Productputative transcriptional regulator 
Protein accessionYP_503333 
Protein GI88603155 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAG CAATCTTTAA CTTCTTAGAA ATAAAAAGGA AGGATGTCTG GAGTATTCCG 
CTCACGATGC TTCAGGAGGT CATCATCAAT GCTCTTGTCC ATGCAGATTA TTCACAGATA
GGAGTACCGA TACGGTTGTC ATTCTTTGAT GACCGGATTG AGGTGGAAAA TCCCGGCATT
CTCCTCCCTG GTATGACGAT TGAGGATGTG AAGTCCGGGG TGTCGAAGAT CCGGAACCGG
GTGATTGCCC GGGTGTTTCG GGAGTTAGAT CTGATTGAAC AGTGGGGGAG CGGGTTTCGC
CGGATACTTC AAGAGGCTTC GGATTTGGAG CTTACCGAAC CGGTGATCGA GGAGATCGGG
ATGCGGGTCC GGGTGAGAGT TTTTCTCTCT GAAGAACTGG TGATTCATAC CGAGGGACTA
AGTAGGGACC AAGTTGGGAC CAAGTCGGGA CTCAGTCCTT CCGGCAGGGA CCAGGTTGAT
CTGAATGATG AGCAGCGAAT GGTCTTGCAG AAATGCATTC AGGAGTCCGG AATTACAGAC
CTGATGGCGG TGGTACAGAG AACCAACCGG AGTACGTTCA GAGAAGCGGT GATCAATCCG
TTGCTGGATA AGGAGCTGCT GGAGATGACG ATACCAGATA AACCAAACAG CAGTAAGCAG
AAGTACCGGA TTACCCCGAA AGGAAAGGAT CTTCTGGCAA TTATATGA
 
Protein sequence
MHEAIFNFLE IKRKDVWSIP LTMLQEVIIN ALVHADYSQI GVPIRLSFFD DRIEVENPGI 
LLPGMTIEDV KSGVSKIRNR VIARVFRELD LIEQWGSGFR RILQEASDLE LTEPVIEEIG
MRVRVRVFLS EELVIHTEGL SRDQVGTKSG LSPSGRDQVD LNDEQRMVLQ KCIQESGITD
LMAVVQRTNR STFREAVINP LLDKELLEMT IPDKPNSSKQ KYRITPKGKD LLAII