Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1858 |
Symbol | |
ID | 3922652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 2098306 |
End bp | 2099349 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637897474 |
Product | CRISPR-associated Cas1 family protein |
Protein accession | YP_503294 |
Protein GI | 88603116 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.235229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.181235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTG AGAATGAGGT CCATATAGAG AATGCTTCTG AATCAAAACG AGAACCCAAA CCTCCTGAAG GGCTTTTGGA AGATGATACA ATTTATATAA CTACCCCCTA TGGGAAGATA TCTCTGGATG GAGGAAGGAT TCAGGTTAAG GATTCTGATG GAGAGATTGT GGCCTCATTT CCTTTGGAAA AAGTGTGCAC AATGAATGTT TTTGGTTCTG CCAGTGTATC TACTCCTCTT CTTAAGCACT GTTCTGACAA AGAAGTTGTG ATCAATTATT TTACCAATTT TGGCAAGTAT TTCGGTTCAT TTGTCCCTTC CAGGAATACC ATTGCTCTCG TGAGGAGACA TCAGGCAGGG ATTACAAAAG AGAAGTCTCT TGCTATCTGT CGTGAGATTA TTCATGCCAA ATTACAGAAT TCATGTGTTT TTCTTGCAAG GAAGAGGGTT GAAGTTCCTT CTTTGCTGAA AGAATTACGG GACAGATCCC TCCATGCGGT TTCTGTTGAT TCTCTTCGGG GGATTGAAGG AGAGGCTGCA AGTATCTATT TTCCGATGCT CTCTTCGAGC CTTCCCGATG AGTGGAGATC TGATAAACGG ACAAGAAGGC CTCCCCGTGA TGAACTGAAT GCTCTGCTCT CTCTTACGTA TACGATGGTG AATACTGAGG TTATCAGTGC TCTTCGTCAG TACAATCTTG ATCCTTTTAT AGGGGTTATG CATGTTGACC GGCATGGAAA GCCAGCATTA GCACTTGATC TTCTTGAAGA GTTCAGACCG GTTTTTTGCG ATGCGTTTGT TGCACGGCTG ATTAATAAAC GGATGATTAC AAAGGATGAC TTTACCCAAG GGTCGCGTCT GAATGATACG GCTTTTAAGA AATATCTGGG GTTTTATCAT GATTTCATGG AGGAGTCATT AAAGCATCCT CGTTTTAAGT ATTCTGTCTC AAGAAAGAAG GCTATTCAAA TTCAGGCAAT TATTTTCCGA AAAGCAATTT GTGGTGAGCT GAAAGGGTAT TACCCGTTTA TTTATGCCAG GTGA
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Protein sequence | MNIENEVHIE NASESKREPK PPEGLLEDDT IYITTPYGKI SLDGGRIQVK DSDGEIVASF PLEKVCTMNV FGSASVSTPL LKHCSDKEVV INYFTNFGKY FGSFVPSRNT IALVRRHQAG ITKEKSLAIC REIIHAKLQN SCVFLARKRV EVPSLLKELR DRSLHAVSVD SLRGIEGEAA SIYFPMLSSS LPDEWRSDKR TRRPPRDELN ALLSLTYTMV NTEVISALRQ YNLDPFIGVM HVDRHGKPAL ALDLLEEFRP VFCDAFVARL INKRMITKDD FTQGSRLNDT AFKKYLGFYH DFMEESLKHP RFKYSVSRKK AIQIQAIIFR KAICGELKGY YPFIYAR
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