| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1833 |
|---|
| Symbol | |
|---|
| ID | 3923853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2065811 |
|---|
| End bp | 2067874 |
|---|
| Gene Length | 2064 bp |
|---|
| Protein Length | 687 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637897452 |
|---|
| Product | formate dehydrogenase, alpha subunit |
|---|
| Protein accession | YP_503272 |
|---|
| Protein GI | 88603094 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00515495 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAACC AGGTCCCGAC CATATGTCCG TACTGCGGTA CCGGGTGCTC TGTACATCTT
ATTGTTCAGG ATGGGAAAAT TACCGGGACA ACCCCGAATA TCCGTTCTCC GGTGAATGAA
GGAAAACTCT GTCCGAAGGG TACGTACTGC CACCAGTTTA TCCACAGCCC GGATCGGCTC
AAAAAACCCC TCATCCGGAA AGGCGATGTG TTTGTGGAGA CAGACTGGGA GACCGTTTAT
CATCTGATCG CCCAAAAACT TACCACCTAT TCTGCAGATG AGATCGGGGT GCTGGCATCA
GCCCGGTGCT CGAATGAGGA TAATTATGTC CTGATGAAGT TTGCCAGAGG TGTTTTAAAG
ACAAATAATC TGGATCATTG TGCCAGGTTC TGTCATGAAG CGACCATGAC CGGTCTTACC
CTTTCATTTG GGAGAGGGGT GATGACAAAT TCCATCCCTG ATATCGGGAG ATCTGACTGT
ATCTTCTGTC TTGGTTCCAA CACCTTTGAG CAGCATCCGC TTATCGGGAG GCAGATTGTC
CGTGCACAGG CTGCCGGGGG GAGGTTTATA TATGCAGATC CCCGGTATAC CCCGACGGCG
ATCCAGGCAG ACCTGTTTCT TCAGTTCTAC AGCGGGAGTG ATGTTGCAGT TCTCAACTGC
ATCATGGGAG AGATTATTCG AAATGGTTTA GAAGACAAGG ATTTCATCAG ATCCCGGACC
CGTGAGTATG AATCGCTGAA AAAACTTGTC CTGCAAAACC GGTATACTCC CCAGGAAGTA
AGCATTCTGA CCGGTGTGTC AAAGACTGAT CTCATCAGGG CAGCAGAATG GATTGGATCT
GCGGACCGGT GTACGGTTCT GTATGCCATG GGTCTTTCGC ATCTGTCCGG GGGCGTTCAT
AATGTCAGGG CGATTGCAAA CCTGATGATG CTGACCGGAA ATATCGGCCG GCCCGGGACC
GGTGTCAATG CACTCCGTGG GCAGAATAAT GTGCAGGGAG CCTGTGATAT GGGGTGTCTG
CCTGACTTCT TCCCTGGATA TAAGCCGGTT ACCGACGGTA ACTTCCATCA GAAGATAGCG
AGAACCTGGA AATTTCCAGA GAATATCGCC CCGGCACGGC CCGGTCTTGA CATGAACCGG
ATGTTTCAGA AGGCTGGTGA GAGTTCCAAC CGGATAAAAG CGATGATCCT GGTCGGGGAA
AACCCGCTGG TGACTGAGCC GGACCGGCAC ATCGTTGAAC ATGCGATAAA AAACCTGAAA
TTCCTGGTAG TATCTGATAT CTTCTTTACC AAAACCTGTG AATATGCCCA TGTTGTCCTT
CCCGCCGCAT GTTATGCAGA AAAGGACGGG ACGGTTACCA ATACCGAACG GAGAGTTCAG
CGGCTGCGAA AGGCAGTTGA AGCTCCGGTG CTTGCAAAAC CTGACTGGCA GATAATTACG
GAGATTGCCT GCCTGATGGG GTATGAAAAG CAGTTTCCCT ATCAGCATCC ATCTGACATC
TTCAGGGAGA TTACGACGGT ATGTGAACCG TACCAGGGGA TGACCTTTGA ACGGGTGAGC
CTTCCAGACG GGATCTGCTG GCCATGTGTA TCTGCTGATG ACCCTGGCAC GGCTATTCTC
TATTCTGACC GGTTTTATCA TCCGGACGGG AAGGGTGTGT TCTGTCCGGT TGAATGGAAG
GCACCTGCTG AGCTCCCTGA CTCCCGGTAC CCGTTCAGGC TGACATCAGG CCGGGTTATC
TGGCACTGGC ATACCGGGAC GATGACCAGG AGGAGTAAGA ATCTTACCGA TGAGCTGAAT
GAGGTGTATA TAGAAGTTCA TCCGTCAGAT GCAGAAAAAG TCCGGATATC AGACGGGGAT
ATGATACAGG TCCGGTCCAG GAAAGGGGAA TTATCCTGCA GGGCACGGGT TGTGTCAGAT
ATTAAGGAGG GGATGATCTT CATGCCGTCG CTGTTTGATG CAGCGTTGAA CCGGCTGATG
GGTCTTTCTG AATCAGGCCC CGGATTTTCT GAATATAAAC CAATCTGTGT CTCCCTTGAA
CCGGTCGGGG GTGGAGAGGT ATGA
|
|---|
| Protein sequence | MINQVPTICP YCGTGCSVHL IVQDGKITGT TPNIRSPVNE GKLCPKGTYC HQFIHSPDRL
KKPLIRKGDV FVETDWETVY HLIAQKLTTY SADEIGVLAS ARCSNEDNYV LMKFARGVLK
TNNLDHCARF CHEATMTGLT LSFGRGVMTN SIPDIGRSDC IFCLGSNTFE QHPLIGRQIV
RAQAAGGRFI YADPRYTPTA IQADLFLQFY SGSDVAVLNC IMGEIIRNGL EDKDFIRSRT
REYESLKKLV LQNRYTPQEV SILTGVSKTD LIRAAEWIGS ADRCTVLYAM GLSHLSGGVH
NVRAIANLMM LTGNIGRPGT GVNALRGQNN VQGACDMGCL PDFFPGYKPV TDGNFHQKIA
RTWKFPENIA PARPGLDMNR MFQKAGESSN RIKAMILVGE NPLVTEPDRH IVEHAIKNLK
FLVVSDIFFT KTCEYAHVVL PAACYAEKDG TVTNTERRVQ RLRKAVEAPV LAKPDWQIIT
EIACLMGYEK QFPYQHPSDI FREITTVCEP YQGMTFERVS LPDGICWPCV SADDPGTAIL
YSDRFYHPDG KGVFCPVEWK APAELPDSRY PFRLTSGRVI WHWHTGTMTR RSKNLTDELN
EVYIEVHPSD AEKVRISDGD MIQVRSRKGE LSCRARVVSD IKEGMIFMPS LFDAALNRLM
GLSESGPGFS EYKPICVSLE PVGGGEV
|
|---|
| |