| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1818 |
|---|
| Symbol | |
|---|
| ID | 3923723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2053531 |
|---|
| End bp | 2055090 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637897437 |
|---|
| Product | NADH dehydrogenase (ubiquinone), 30 kDa subunit |
|---|
| Protein accession | YP_503257 |
|---|
| Protein GI | 88603079 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
[COG3261] Ni,Fe-hydrogenase III large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.207478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGTG TACATGCACA TTATTCAGCC CTCTCCCTCC CGGCCGAATG GCTGATAGGG
GAAGATATGA CAACCATCTC CTATGCAGTG CCTGATGAGC GTATCAGAGC GGTTGCAGAG
ACACTTCTGG CTCTTGAGTC CCGTTTGGTC TGGATATTCT GCGAAAGAGA AGCGAAAGAT
GGTTCCTTTG TGCTAAGGTA TGTCTTTGAG CTCACAGAGA TGAGGAAATA TCTTGTCCTG
GTCCTCAATA CCCGAATGCC AGAGTCACTT GTGGAGATCT ATCCTGCTGC GAGCAGGTTT
GAACGGGCGA TCACTGATGG ATTTGGTCTT CAGTTTGCCG GCTCTCCTGA TACCCGCAGA
CTCTTCCTTC ATGAAGCATA TCCTGACGGG TTTTATCCAT TAAAAAAGAG TATCAAGAAT
GCCCCCATCA CCCCCTTCAC GGCGTCGGAC CATACGACTC CCTATGAATT CAGGACCATG
GAAGGGACAG GGGTGTATCA GGTTCCGGTC GGACCGGTCC ATGCAGGGAT CATCGAGCCA
GGGCATTTCC GGTTCTCGGT GATAGGGGAG GACATTTTAA ACCTTGAGAT TCGTCTTGGA
TACCTGCACC GGGGTATTGA GAAACGTGCT GAGGGGTGCA GTCCTGAAAA AGGGGTGAGG
ATTGCAGAGT CAGTGAGCGG AGATGAGTCG GTTGCCAATG CCTGCTGCTA TGCGATGGCA
GTTGAACAGA TCTTATCAGT ACAGGTCCCG CCCCGTGCAG TCTGGCTCCG GGCGTATTTC
CTCGAGCTTG AACGATCCTG GTCACTGCTC TCAGATCTGG CCGGTATGGT CACCGATGTT
GCGTTTTCCA CGGCAGCAAG CCGGCTTCTC ATTCTCCGCG AGACGGTGCA GCGGGTTTGT
GAACGCCTGA CCGGTTCACG GTTCCTGAAA GGGATTATCG GTATCGGCGG TATCAGCCAT
GACATCCCCG ATGATCTGCT GGTTGAGGTG ACGGATACGC TCATGAAGGT CAGGGTCGAT
CTTGAGGGCA TCCTGTCCTG GGTCCTCTCT GTCCCGTCTG TTATTGACCG GTTCTCCACA
ACCGGGGTGG TGCGGGAGCC ACTCATCGAT CCTCTGGCAC TATCCGGGCC GGTGGCACGG
GCGAGCGGCC GGGCACTTGA TGTCAGGTCA GATCATCCCT ATGGCCTGTA CGAAACTCAT
CCCATTCCTC CGCTCACCCG GATGACCGGT GATGTCCTGG GACGGTTTGC CCTGAAGGGT
GATGAGGTCC TGGCATCCCT TGCGTACATC ACCGAACTCG TCAGGCAGAT ACCAAAAGGG
CCGGTTCAGG CAGAGTATGA GGTCTGTGAT GGAGATGCCC TTGCAGCCGT TGAATCCCCC
CGAGGACGAA ATCTCTGTTA TGTCAGGATA TGTGATGGCT CTATTGACCG GTTTGCCCTG
TCCACCGCGT CGTTCTGTAA CTGGATGGCA CTCGAGCATG CCGTTCTGGG AAATATCGTC
CCTGATTTCC CGGTTATAAA TAAGAGTATG AACCTCTCGT ATGCAGGGAC CGATCTGTGA
|
|---|
| Protein sequence | MTGVHAHYSA LSLPAEWLIG EDMTTISYAV PDERIRAVAE TLLALESRLV WIFCEREAKD
GSFVLRYVFE LTEMRKYLVL VLNTRMPESL VEIYPAASRF ERAITDGFGL QFAGSPDTRR
LFLHEAYPDG FYPLKKSIKN APITPFTASD HTTPYEFRTM EGTGVYQVPV GPVHAGIIEP
GHFRFSVIGE DILNLEIRLG YLHRGIEKRA EGCSPEKGVR IAESVSGDES VANACCYAMA
VEQILSVQVP PRAVWLRAYF LELERSWSLL SDLAGMVTDV AFSTAASRLL ILRETVQRVC
ERLTGSRFLK GIIGIGGISH DIPDDLLVEV TDTLMKVRVD LEGILSWVLS VPSVIDRFST
TGVVREPLID PLALSGPVAR ASGRALDVRS DHPYGLYETH PIPPLTRMTG DVLGRFALKG
DEVLASLAYI TELVRQIPKG PVQAEYEVCD GDALAAVESP RGRNLCYVRI CDGSIDRFAL
STASFCNWMA LEHAVLGNIV PDFPVINKSM NLSYAGTDL
|
|---|
| |