| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1793 |
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| Symbol | |
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| ID | 3924442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 2027646 |
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| End bp | 2028287 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637897413 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_503233 |
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| Protein GI | 88603055 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGATA TCATCATGAA ATGGGTATAT GTGCTGTTCT TTCTTGTAAT GATCTCCGGG
TTCTGGTCGG TTGTTGCATC CCCGGCAGAT GAACTGGCAG CACAGGGGAA CATGCTCTAT
GATCAGGACC AGTATGACGA AGCTCTCATC ATACTCGATC AGGCCCTGGC AATCGACCCT
GAACATCTCG AAGCTTTAAA CGGGAAAGGA AAAGTCCTGA AAAGTCTGGG AAGGTATGAG
GAGGCAATAC AGCAGTATGA TAAGATAATC GCTGTTGATC CAACCTATAA AAAAGCCTGG
AATAACAAGG GAATCGCCCT GACCTACCTG GGAAGATATG AGGAGGCCAT TGCCATGTTT
GATGAATCAT TACGGCTGGA TCCTGAATAT GGGAAGGCAT ACAGTAACCG GGCCTGGTGC
CTTAACCTTG CCGGACGATT TGAGGAAGCA TTGGCATCAG CAGATAAAGC AACCATACTC
GAGCCTGATT ATGCACGGGG ATGGAGCAAC CGGGGAGATG CCCTCTCTGC TCTGGGCCAG
TATGCCGAGG CAGTAATGTC GTATGATACT GCGCTTATTC TGGATCCCGG ACTTCTTGAT
GCCCTGGAAG GAAAAGAGAA AGCGATAGCA AAGATGTCAT AA
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| Protein sequence | MYDIIMKWVY VLFFLVMISG FWSVVASPAD ELAAQGNMLY DQDQYDEALI ILDQALAIDP
EHLEALNGKG KVLKSLGRYE EAIQQYDKII AVDPTYKKAW NNKGIALTYL GRYEEAIAMF
DESLRLDPEY GKAYSNRAWC LNLAGRFEEA LASADKATIL EPDYARGWSN RGDALSALGQ
YAEAVMSYDT ALILDPGLLD ALEGKEKAIA KMS
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