Gene Mhun_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1788 
Symbol 
ID3924437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2021312 
End bp2022070 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content50% 
IMG OID637897408 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_503228 
Protein GI88603050 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTTG ATGATATCGT CGCATCAGCC CACCGGCGGG CATCTGAGCT CCCCGGCTTC 
TTTCAGACAC CCTCTCATAC CCCCATCAGT CTGAAAGATG CAATCATTCA GAAACGGAGA
ACTCATGCAC ATCCGGTTAT TGCTGAACTC AAGTTTGCGT CACCTTCACG GGGGATCATC
AGAAGAGAGA CAAAGCCCGA AGATGTTGCA ACTGAACTGG TGCATGGAGG TTGCTGTGCT
CTTTCGGTCC TGACTGAACC TGAATACTTT TCCGGGTGTT CAGCAACCAT CCCGGCCATC
AGGGACAAGG TAACGGTTCC AATCCTCAGA AAGGACTTCA TCGTGGATGA GCAGCAACTG
GACGAAACCA GGGCTCTTGG AGCGGATGCT GTCCTTCTGA TCGCCGGGGT TCTTGGAGAA
GAGACCGGGC ACTTTGTCGA AGCAACAAAA AAACGCGGTC TTGAACCTCT GCTTGAAGTA
CATACCAGAC AGGAGGCACG AATGGCAGTC GATACCGACG CAGAACTCAT CGGGATAAAT
AACCGCGACC TTCGGACATT CAAAACCGAC CTGTCCACCA CAAAGCGAAT TGCTCCCCTG
ATTCATCAGG CAGGCAGAAC CGTTGTATCT CTGAGCGGGA TGATCTGGCC CTGTGATATC
AGGTTTATGA GTCATTACGC AGACGGGTTT CTTATCGGAT CAAGTATTAT GTCCTCAAAA
AATCCAGGAA AAAGAGTGGA GGGATTGGTA TACGCATAA
 
Protein sequence
MILDDIVASA HRRASELPGF FQTPSHTPIS LKDAIIQKRR THAHPVIAEL KFASPSRGII 
RRETKPEDVA TELVHGGCCA LSVLTEPEYF SGCSATIPAI RDKVTVPILR KDFIVDEQQL
DETRALGADA VLLIAGVLGE ETGHFVEATK KRGLEPLLEV HTRQEARMAV DTDAELIGIN
NRDLRTFKTD LSTTKRIAPL IHQAGRTVVS LSGMIWPCDI RFMSHYADGF LIGSSIMSSK
NPGKRVEGLV YA