Gene Mhun_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1742 
Symbol 
ID3925155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1966581 
End bp1967429 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content49% 
IMG OID637897363 
Productrespiratory-chain NADH dehydrogenase, subunit 1 
Protein accessionYP_503183 
Protein GI88603005 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.587044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.34586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGT TCATTGCAGC AGCATTGTTT ATCATTCTTG CACCGGTTGT CGGCATACTC 
ATCACCGGGC TGGACCGGAT ATTGACTGCA CGGATGCAGG GGAGAGTCGG ACCGCCGGTT
CTCCAGCCCT GGTATGATAT CCGCAAATTA TTCCAGAAGA AACAGGTCGC AGTATGGGGA
GCACAAAGCT TTTTCATCTT CTGCTATCTC ATATTCATCA TATTCACCGG GGCACTCTTC
TTTGCCGGAG GGGACATCTT ACTGGTCATA TTCGCCTTTA CCCTTGGCCA TGTCTTCCTG
GTGCTTGGTG CCTATGTATC GTACTCGCCC TATGCTCATA TCGGAGCTGA GCGGGAACTT
ATCCAGCTGA TGGCTGTCGA ACCGATGATC ATCATCGCAG CCATCGGACT TTACCAGGTG
AATGGTTCAT TCCTGATTGG TGATATGGCA AACCATCCTG GTCTTCCCAT ACTGCTTCTA
CCGGGCGTAT TTCTCGGATT TATCTATATA TTAACGTTTA AACTGAGGAA ATCACCCTTT
GATCTGGCAA CCTCACATCA TGCACACCAG GAACTCGTAA AGGGAAGTAC GACCGAGTTT
TCAGGCTGGA CCCTTGCAAT GGTCGAACTT GCCCATATCT ATGAACTTGT CGTGATGCTC
GGGTTTATCT GGTTATTCTT TGGGGATAAT CTGATCCTGT GTGTGGCTGC AATAGCAATC
ATCATGATCC TTGAGATTCT GGTCGATAAC TGCACATCAA GAGTCCGCTG GCAGGATGCC
ATGACCAGTG CCTGGTTTGT CACCCTTGTT GCCGGAGCCG GAAATATCTT TGCCCTTTCA
ATTATGTGA
 
Protein sequence
MDPFIAAALF IILAPVVGIL ITGLDRILTA RMQGRVGPPV LQPWYDIRKL FQKKQVAVWG 
AQSFFIFCYL IFIIFTGALF FAGGDILLVI FAFTLGHVFL VLGAYVSYSP YAHIGAEREL
IQLMAVEPMI IIAAIGLYQV NGSFLIGDMA NHPGLPILLL PGVFLGFIYI LTFKLRKSPF
DLATSHHAHQ ELVKGSTTEF SGWTLAMVEL AHIYELVVML GFIWLFFGDN LILCVAAIAI
IMILEILVDN CTSRVRWQDA MTSAWFVTLV AGAGNIFALS IM