| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1741 |
|---|
| Symbol | |
|---|
| ID | 3925154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1964701 |
|---|
| End bp | 1966575 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637897362 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_503182 |
|---|
| Protein GI | 88603004 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.449294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.713661 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGCC TTTTGACACT CATTCAGGGC GAGAATTTCA GAAGAGCGGC AGTTATAAGT
GGAGCAGTCC TGGTTGGGAT TGCTTCTCTC ATTACCCTTG CAGACAGTAT CACCACCCAG
GCAGTATACC ACTCTGTTCC GGTCGATATG ATTGGTATAC TCATATTTAT TGGTGATATC
CTCATTAGCG GGTATATCAT CTTTGTCAGT CTGAAAGCAC GGCAGTATCT GGTAACCGGC
ATCACCATCC TGCAGCTTAT TCTCCTGTGT GCCGTCGAAT ATCTGGCACT CGCAGACCAT
GCCCATATTC CTGAATTATT TTCAGATCAA CTTTCAGGAA TCATGGCTGC CATTATCGGA
GTCATTGGAG GCCTTATCTG TGTATATGCT CTTGGATACA TGCGAGAATA TCATGCAGAG
CATCCGGACC GTCCGGATAA GAGGCCCAGG TTCTTCGGAA TCATGTTCCT CTTCCTTTCG
GCAATGTTCG GAGTGGTCTT CTCAAATAAC CTTCTCTGGC TGTTTTTCTT CTGGGAAATA
ACCACACTCT GTTCATTCCT GCTTATCAGA TATCCGGAGA CGGATGAAGC GGTAAAGAAT
GCTTTCAGGG CTCTGCTCTT CAATCTGGTC GGAGGAGCAT GTATTCCGGT TGCGTTCCTG
GTAATTTTCC TAGGCCAGGG ATCACAATAT ATCGGACTTC ATGAACTGGT AACTGCAGGA
CCCGGTATTG CCCTTATTCC CGCAGGACTC ATAGCCATTG CAGGACTTGC AAAATCTGCA
CAATTCCCCT TTTCATCATG GCTTGTCGGA GCAATGGTTG CACCAACCCC GGTTTCAGCC
CTTCTTCACT CAAGTACCAT GGTAAAAGCA GGGGTCTATA TTATTGCACG GTTCGCCCCG
GTCTTTGAAG GACAGATTGT AGGGATCCTT ATTGCGCTTA TCGGGGGAAT CACGTTCCTT
GCTGCATCCG CCATTGCCAT TTCACAGAGC AATGCAAAAA AGGTCCTTGC GTATTCAACT
ATTGCAAATC TGGGACTGAT TGTTGCATGT TGTGGTGTCG GAACTGCAGA GGCACTCTGG
GCTGCAATCC TTCTGATCGT CTTCCATGCT ATTGCAAAAT CCCTGCTCTT CCTCTCGGTT
GGAACGGTGG AGCACCAGAT TCATAGCAGA GATATTGAAG ACATGAACGG TCTTGTCACC
AGGATGCCCC GGATTACCAT GATTATCCTG ATAGGAATTG CCGGCATGTT TCTGGCACCG
TTTGGAATGC TCATCTCGAA ATGGGCATCC CTCCATGCCT TTGTGGAATC AGTTCCTCCA
TATGGTATCC TCCTGGTTAT CATCATCGCG TATGGCAGCG GGATTACCGC CTTTTTCTGG
GCAAAATGGA TGGGGAAACT CATCGCCGTC GGAGAACCAC AGACAAAAGA CGAATCCCAT
ATCCCAAGAT CTGAAAAGAA CATTCTCTAT ATTCTCTCAG CACTTACCAT AGGAGTCTGT
TTCGGGTTTC CCATCATCTC ATGGTACCTG ATTGAACCCT GGCTCCTAAC CATGTATCAG
TCGGTCACGG ATCTCATCTC ACTGAGCAAT ATCGAGATCA TGTTCATGAT GCTCTTTTTA
GTGCTCATTA TGCCGTTTTC TCTCGCCCGG TTCACGCATT CAGCACGACG GGTTCCCCGA
TACCTGTGTG GTATTCCGGA GGGACGGAGC ACTGCATTCA TGGGTAGTTG TGGGATAAAC
CGGGAAATAG CACTCTCAAA TTACTATCTT GAGCGGATAT TTGGTGAAGA ACGTCTCTCC
CGAATCAGTG TGGGGATGGG TATCTTCCTG ATAGTCCTGC TTCTCAATAT TCTTATTATC
GGAGGTGGCC TGTGA
|
|---|
| Protein sequence | MAGLLTLIQG ENFRRAAVIS GAVLVGIASL ITLADSITTQ AVYHSVPVDM IGILIFIGDI
LISGYIIFVS LKARQYLVTG ITILQLILLC AVEYLALADH AHIPELFSDQ LSGIMAAIIG
VIGGLICVYA LGYMREYHAE HPDRPDKRPR FFGIMFLFLS AMFGVVFSNN LLWLFFFWEI
TTLCSFLLIR YPETDEAVKN AFRALLFNLV GGACIPVAFL VIFLGQGSQY IGLHELVTAG
PGIALIPAGL IAIAGLAKSA QFPFSSWLVG AMVAPTPVSA LLHSSTMVKA GVYIIARFAP
VFEGQIVGIL IALIGGITFL AASAIAISQS NAKKVLAYST IANLGLIVAC CGVGTAEALW
AAILLIVFHA IAKSLLFLSV GTVEHQIHSR DIEDMNGLVT RMPRITMIIL IGIAGMFLAP
FGMLISKWAS LHAFVESVPP YGILLVIIIA YGSGITAFFW AKWMGKLIAV GEPQTKDESH
IPRSEKNILY ILSALTIGVC FGFPIISWYL IEPWLLTMYQ SVTDLISLSN IEIMFMMLFL
VLIMPFSLAR FTHSARRVPR YLCGIPEGRS TAFMGSCGIN REIALSNYYL ERIFGEERLS
RISVGMGIFL IVLLLNILII GGGL
|
|---|
| |