Gene Mhun_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1716 
Symbol 
ID3924896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1933775 
End bp1934725 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content51% 
IMG OID637897338 
Productribonuclease Z 
Protein accessionYP_503158 
Protein GI88602980 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID[TIGR02651] ribonuclease Z 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATAA TCGCCGGAGA GACCCTGCAG ATATTTTTCC TGGGAACGTC CGGGGCACTT 
CCCACCATAT CCCGGAATCT TCCGTGCATC CTCTTAAAAT GGGGGTCTCA TGACCTGATC
TTTGATTGCG GAGAAGGGGC ACAGCGGCAG ATGATGAAAG CGCGTGCCGG GTTCTCTCCC
GAAGTTATCT ATATATCCCA CTGGCATGCC GACCATTTTC TCGGGGTTAT CGGCCTTCTG
CAGACGATGT CCTTTAACGG ACGAGAGCAG CCATTGATGA TCGTCGGCCC GGACTGTGTG
CATGAGATGG TGAACGATAT CAAAGGGTTG TGCAGGACCA GGCTGTCATT CCCCGTAGAA
TCGCAAAAGG TCCGTGCAGG TGATCTGCTC ATCTATGAAG GATATTCAAT CAGGGTCTTT
GCAGCAGATC ATGGTATTCC CGGAGTCGGG TACATCTTTG AAGAGAATAT GAGACCAGGG
CGGTTCAACC GGGAACGTGC CATTGAACTC GGTATCAGGC CAGGACCACT CTTTGGGAAA
CTGCAGCGGG GCTCATCGGT TACCATCACC GTCGATGGGG AAGAACGGAT CATTACTCCC
GAAATGGTCA TGGGACCCAT GAGACCGGGC AGGAAAGTTA TCTATACAGG GGACACAAGA
CCGGTCCTTT CAGAACTTGC AGATATCGGA GATGATGCAG ATCTCCTCAT CCACGATGCG
ACGTTTGACC ATCAGGAAGA AGAACGGGCA ATAGAGTTCA TGCATGCAAC TGCGGCAGAG
GCGGGTATGG TTGCCCATAC CCTGAAGGCT CACCGTCTTG CCCTCTTCCA TTTCAGCACC
CGGTACACGT CTGCTGATAA TCATGTTTCT GATGCAAAAA CTCATTTTTC AGGAGATATC
CTTGCTCCTG ATGATCTTAC CGTTTTTGAT ATCCCGTTCA GGGATGAATA A
 
Protein sequence
MDIIAGETLQ IFFLGTSGAL PTISRNLPCI LLKWGSHDLI FDCGEGAQRQ MMKARAGFSP 
EVIYISHWHA DHFLGVIGLL QTMSFNGREQ PLMIVGPDCV HEMVNDIKGL CRTRLSFPVE
SQKVRAGDLL IYEGYSIRVF AADHGIPGVG YIFEENMRPG RFNRERAIEL GIRPGPLFGK
LQRGSSVTIT VDGEERIITP EMVMGPMRPG RKVIYTGDTR PVLSELADIG DDADLLIHDA
TFDHQEEERA IEFMHATAAE AGMVAHTLKA HRLALFHFST RYTSADNHVS DAKTHFSGDI
LAPDDLTVFD IPFRDE