Gene Mhun_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1654 
Symbol 
ID3924812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1875011 
End bp1876210 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content45% 
IMG OID637897284 
Producthypothetical protein 
Protein accessionYP_503104 
Protein GI88602926 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.498405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.951827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGG TTAATATTCC GGTTTATCTG GCTGTTCGTG CAATACAAAG GGGGAATAAG 
GGGACATTTC TCCTTACTAT CATGATCGTG GCATTATCCT TTGTTTTAAT GGTCTTTATG
CCATCCCTTA CCGCAGGACT TACCGGGGCA TATAATCAGC AGGTCAGTGA TTACCAGTAT
GCTGACCTGA TTATCGAACC GGATGATGAT AATCAGGTTC TATCAGATAC TCATATGCTG
GTCAGAACCA TCGAGCGGAC TCCCGGTATC GCTGCAACCT CGTCACATAT GATCGTCAGT
ACTTCGTTGG AATCGGATAA AAAGATTCTA TCACGGGGGG TTGTCGCAAT TATCCCGTCT
GATGAAGAAC GTGTCACAAA GACCTTTGGG AAGATAACTG AAGGTCGGTA TCTCTCTGAT
GGAGACACTG ATGTGATTCT GCTCGGTTCA GTGCTTGCCG GTCATGATGA TGAAAAAAAG
GATAAAATGG AATCGCTGGG CGGGGTTCAT GCCGGTGATT CACTAAAAGT TACATTTCAG
AACGGCATTG TCAGGAAAAT GACCGTGGCA GGGATATTTG AGACAGGCTC CATCTCTGCT
GATAATGAAG CATTCATCAC ACAAAAAGAG ATGGAATCAG TACTTGGACC GACTGACAAA
TCGTCTCTCA TTCTCATCCG CTCATCTGGT GCAGAGACCC TTGCTCAGAC CAAGATACGG
CTTATGGAGT TTGGAATTCG TGATGACATC AAGACGGTAA CCGAAAAAGG AGAAGGGATA
ATTGGTGACG CATTGAAGAG TTTCTCCCTC CTGAATTCAA TCATGCTGGT CTTTTCCCTC
GTTATTGCAA GCATTGTCAT ATTTATTGTA GTATACATCA ACACAACCCA TCAAAGAAGA
CAGATAGGCA TTCTCAAGGC CATTGGTATT CCTGAACGGG ATATAATCAG GGACTACCTG
GTTCAGGTGG CCGTCATCTA TGGATGTGGT GCTCTCTGCG GGGTGGCACT CTTTACGTGT
CTGAGTGAAT ATTTCAGGGC TTTTCCTCTT CAGTTTCCGG CCGGTGCAGT GTATCCGGTG
TTTGATCTGA CTGTCCTTCT TCCTTCTCTT ATGGTTCTTG GGTTCGTTTC CCTGATAGCC
GGTTTTATTC CTGCTAAGCA GGCAACATCT GAAGATATTC TGGATCTGGT GAACCGATGA
 
Protein sequence
MKTVNIPVYL AVRAIQRGNK GTFLLTIMIV ALSFVLMVFM PSLTAGLTGA YNQQVSDYQY 
ADLIIEPDDD NQVLSDTHML VRTIERTPGI AATSSHMIVS TSLESDKKIL SRGVVAIIPS
DEERVTKTFG KITEGRYLSD GDTDVILLGS VLAGHDDEKK DKMESLGGVH AGDSLKVTFQ
NGIVRKMTVA GIFETGSISA DNEAFITQKE MESVLGPTDK SSLILIRSSG AETLAQTKIR
LMEFGIRDDI KTVTEKGEGI IGDALKSFSL LNSIMLVFSL VIASIVIFIV VYINTTHQRR
QIGILKAIGI PERDIIRDYL VQVAVIYGCG ALCGVALFTC LSEYFRAFPL QFPAGAVYPV
FDLTVLLPSL MVLGFVSLIA GFIPAKQATS EDILDLVNR