| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1651 |
|---|
| Symbol | |
|---|
| ID | 3924340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1872367 |
|---|
| End bp | 1873182 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637897281 |
|---|
| Product | histidine kinase, HAMP region |
|---|
| Protein accession | YP_503101 |
|---|
| Protein GI | 88602923 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0971523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.929646 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATA TGCTGCACTC AATTATGACA AAACTCACCG CCGGTTTTGT TATTCTGGTA
ATTCTTATTA CCGGACTTAC ATTTTTGTTT ACCGTCGGTG CATCGACTGA TAAAATTCAG
GAATCAACTC AGCAGGAGCT GGTGGCTCTT GCCTCTCTCA CTGCAGCAGA CCTGAACGGA
GATGAGATCG CCAAATTAAA ACCTGGAATG GAGGCTGAAA TCCTCTATCT GATGAATGCT
GAACAACTGG CCCATATGTC CCAGGCTGAT CATGAGATCG TGAAGATTTT CACCGCCAGA
AAACAGGGTG ACGGGATGGA ATATGTCATA GACAGCGGGT ATAATATCGG GAAAAGGGAT
GTAAAAATTG GCAATCCCGT CTCAAATCCG ACACCTGCCA TGATATCAGC ATTTACTGGT
CCCTCTGTTG AAAAAGACTT TGTTGAGAGG CCCTGGGGGA CTGTACTTGC CGGGTATGCA
CCGATTAAGA ATGCCAGGGG GGAGGTTATT GGTATTGTTG GTGTGGATAT GGATGCAGCG
GTTGTACAGA ACCGGATGGA CTTTGTTGGT CAGACCATTT ATCTGATTCT GTTCCTTGGC
ATTCTCTGTG CTGGACTTAT TATTGCCATA TTCTCCCGGA CCATGATCCG TGACATTCAC
ATGCTGATAG AATCGGCAAA TAAGATCAGC AGAGGGGATA CGAATGTGTC TATCTCAATT
AATCGGAACG ATGAGATTGG AGAACTTGCT TCATCATTCA AACGGATGAT TACCAGTCTG
AAGATCCTGA TGCACCAGGA CTACCAGCAT GAGTAA
|
|---|
| Protein sequence | MADMLHSIMT KLTAGFVILV ILITGLTFLF TVGASTDKIQ ESTQQELVAL ASLTAADLNG
DEIAKLKPGM EAEILYLMNA EQLAHMSQAD HEIVKIFTAR KQGDGMEYVI DSGYNIGKRD
VKIGNPVSNP TPAMISAFTG PSVEKDFVER PWGTVLAGYA PIKNARGEVI GIVGVDMDAA
VVQNRMDFVG QTIYLILFLG ILCAGLIIAI FSRTMIRDIH MLIESANKIS RGDTNVSISI
NRNDEIGELA SSFKRMITSL KILMHQDYQH E
|
|---|
| |