Gene Mhun_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1622 
Symbol 
ID3923776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1842810 
End bp1843349 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content52% 
IMG OID637897251 
ProductThiJ/PfpI 
Protein accessionYP_503072 
Protein GI88602894 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.91793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTGG AAAAGAAGGT TCTGATTGTC ATTGCCCCGG TAAAGTTTCG CGATGAAGAG 
CTCTCCGAAC CGATAAAATA TCTTGAAAAG GCTGGAATCG GGTATGATAT CATCTCAACA
CAGACCGGTC TTGCAATCGG GATGCTGGGT GGGAAGGTTC TTATTGAAAA GACCGTTCGT
GATGTCAGCG AGGCGGGGAT TACTCCCTAT GCCGGAATTC TGATTGTGGG TGGAGGCGGT
TCGCCGGATC ACCTGTGGAA CAATAAACCT CTCCAGACCC TGGTCCAGGA GTTTGATGCC
GCAGGAAAGA TACTATCTGC CATCTGTCTT TCCACAGTAG TTCTTGCACA GGCAGGAGTG
CTGAAGGGGA AGCAGGCAAC GGTATGGAAT GATGACGCCG CCATTCATCA GCTCCGGCAA
GGGGGGGCGA CGTACAAGCC TGATCCGATT GTATCTGATG GACGGGTTAT TACTGCGAAT
GGTCCTCCCG CTGCGGCAGG ATTTGGAGAA AAAGTTGCCA AAGCCGTGCT GGCAGCATAA
 
Protein sequence
MSVEKKVLIV IAPVKFRDEE LSEPIKYLEK AGIGYDIIST QTGLAIGMLG GKVLIEKTVR 
DVSEAGITPY AGILIVGGGG SPDHLWNNKP LQTLVQEFDA AGKILSAICL STVVLAQAGV
LKGKQATVWN DDAAIHQLRQ GGATYKPDPI VSDGRVITAN GPPAAAGFGE KVAKAVLAA