Gene Mhun_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1600 
Symbol 
ID3923597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1824424 
End bp1826511 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content50% 
IMG OID637897228 
Producthypothetical protein 
Protein accessionYP_503050 
Protein GI88602872 
COG category[S] Function unknown 
COG ID[COG5427] Uncharacterized membrane protein 
TIGRFAM ID[TIGR03662] Chlor_Arch_YYY domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.496393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.92182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAT CAGGACAGAT TATTGCGGTA TTATCCTGGC TCTTCCTTCT TTTCCTATTC 
CATCTCTCTC TCTATCCCTT GATAAAAGAA TACCTGCCCA AAATTGCGGT CCCCGTATCC
TGGACTGCGG GATTTATCCT GACCGCTCTT GCAACCTGGT ATGCAGTCTT TTGTGGTCTT
CCTCCCTATA CTGGTCTGAT CCCGATCATT GTTGCATATC TCTGCACCGG AATATTTCAT
AAGACGGGAC ATTACAAAGC CATCCCCTCA GAATGGCGCT ACTACCTGCT CTTTTTCGGC
GTGTTTCTTG CCATGCTCGT CGTCAGGGCA TACAATCCTG ATATCAACGG GGCGGAGAAA
TTCATGGACC ATGGATTTCT TGCATCGATT CTCAGAACGC CCCTGGTTCC CCCTCTTGAC
CCCTGGTTTG CCGGAGGGTT TCTGAATGTA TACTACTATT TTGGTCACTG GATCATAGCA
ACACCGGCGA TGCTCACCGG GATCCCCTCA AACATCCTCT TTAGCCTTGC TCTCCCCACA
ATCGCCGCAC TTTCTGCCGT CAATCTCTAC GGAGTGGGAC ACCTGACCCT ACGGCGTACC
AGATTACTCC CGGTACTGGC ATTTTTTGTC GTAAATCCGT ACTTCATCTA CCTTGGCCTT
ACCGGAACCA GGGCCTTTAC CCTTCTCTGG GATAGCAGCA GAGTCATTCA GGACACTATC
AACGAATATC CACTCTTCTC ATTTCTGTTT GGTGATGTCC ATGCCCATGT CCTTGGTATC
ATGGCCCAGT CATTTCTGGT TCTCATGGTA ACCGCTGCGT TGGTATGCTG GAGAGATGGA
ACCAGGGCAC GTATCTTAAT TCTTCTCCTG ACTGCACTCG GGCTTTCGGT AATTCCGGTA
GTCAACAGTT GGGATGTCCT GATTTGGGCA CCGATGATTC TGGTAACAGG CTTTTGTCTG
ATTGGACGTG AATATAGAGG GGCACCAGCC CTTACAATTC AGGTTGTTAT GCACACTGTG
CAGACAATGA TCCGGGAGCG GGGGGGACAA TGGTTCCAAA AACCCGTGAT TGCTGCAGGA
TTTTATCTCC TCCTTGTTCC GGCCCTGAGT CTGGCCCTCA TCAGTCCGCT CCTCCTTGGG
ATGCATACCC AGGGAATTGC AGGGATTGGG TTTGTCCATA CCCCGACTGA TATCTGGCAG
TTTATCATGG TCCATGGCTG GTTCTTTGCT GCCTTTTTAT TCTCTTTCAG GTCAGAACTC
AGAAAAGTCC CTTGGATCCT TCTTGCTATC TTCCCGTTCT TTCTGACCGG GTACCTCTCC
GCTGCACTTG CAACCCTGAT CCTGATTTTT GTCATCAGGC GAAGATCAGG ATCTGCAGAT
CTTCTGGCTG CAGGAGGACT TACAATTCTG CTCTTTTGTG AACTTATCTA CCTGGCAGAT
AACATGGGAG AGGTCTATTA CCGGATGAAC ACGGTATTCA AACTCTATAT CGGTGCCTGG
CTCCTCTGCG GAACTGCTGC GGCCCTGATG ATTGGAAACG AGCTGGATGC ATATATCACC
AGAAAACCAG GGCGGACTTC ACGGGTCATC AGTGTATCTA TCATAATCCT GCTCTGTCTC
TGCCTGATTG TCCCCCCGGT CATCGTCTCA ACCATTCACG GACCACATAC CCCTACCCTG
GATGGCATGG CATGGCTTTC ACAATCTCAT AGGGAGGATG CTGAAGCTCT TGCATTTTTA
CGAACACTCC CCGGTGAGCA TATTATCGTG GAAGCAGCCG GGGATGACTA CCAGTATACC
TCACGGGTCT CATCATTCAC CGGAATCCCG ACGATCATCG GATGGCAGTT CCATGAATAT
ATGTGGAGGG GGAATTATCC GGAAGGCTGG TATGGTGAGC GGGGCAATCA TATCAGGACC
ATATATGAAA ACCCGGACCA GACCATCCCC CTCATGGAAC GGTACCGGGC AGATCTGCTC
TATGTCGGCC CTGAAGAGCA ACAAAAATAT ACTATTTCGA TACCTGCCCA TGACCTTCAG
GAACTCTACC GGAATCGCGA TGTCGTGATC TACCAGCATC AGGCTTGA
 
Protein sequence
MIESGQIIAV LSWLFLLFLF HLSLYPLIKE YLPKIAVPVS WTAGFILTAL ATWYAVFCGL 
PPYTGLIPII VAYLCTGIFH KTGHYKAIPS EWRYYLLFFG VFLAMLVVRA YNPDINGAEK
FMDHGFLASI LRTPLVPPLD PWFAGGFLNV YYYFGHWIIA TPAMLTGIPS NILFSLALPT
IAALSAVNLY GVGHLTLRRT RLLPVLAFFV VNPYFIYLGL TGTRAFTLLW DSSRVIQDTI
NEYPLFSFLF GDVHAHVLGI MAQSFLVLMV TAALVCWRDG TRARILILLL TALGLSVIPV
VNSWDVLIWA PMILVTGFCL IGREYRGAPA LTIQVVMHTV QTMIRERGGQ WFQKPVIAAG
FYLLLVPALS LALISPLLLG MHTQGIAGIG FVHTPTDIWQ FIMVHGWFFA AFLFSFRSEL
RKVPWILLAI FPFFLTGYLS AALATLILIF VIRRRSGSAD LLAAGGLTIL LFCELIYLAD
NMGEVYYRMN TVFKLYIGAW LLCGTAAALM IGNELDAYIT RKPGRTSRVI SVSIIILLCL
CLIVPPVIVS TIHGPHTPTL DGMAWLSQSH REDAEALAFL RTLPGEHIIV EAAGDDYQYT
SRVSSFTGIP TIIGWQFHEY MWRGNYPEGW YGERGNHIRT IYENPDQTIP LMERYRADLL
YVGPEEQQKY TISIPAHDLQ ELYRNRDVVI YQHQA