Gene Mhun_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1568 
Symbol 
ID3923348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1796830 
End bp1797411 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content48% 
IMG OID637897196 
Producthypothetical protein 
Protein accessionYP_503018 
Protein GI88602840 
COG category[S] Function unknown 
COG ID[COG4066] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.238081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATC CAGAGCGATC AAAGATAGAA TCAATCGTCG CACGGCTTGC TGGAGCGGCG 
AACAAAGGTG AACTTGGCAC TATCGTTGCA GAAGAAATTC AGAAGTACTC GGTATTTGAG
CTGCAGGTGA TCGGCGGGAG ATTACATCTT GAGATTGAAC GGCTACCTGC ACATTACCGG
CATAAAATCA GATCCTATTT CAAAGACCAG ATATTCGGTG CCCACCACAT ACTCCTGTCC
AGGTATAGAA GTGGTTATTT CAGGAAATGT ACTGATCAGA TTCGTGATCC TGAGCTCTTT
CTCTCGTACT GCCGGATGAT ACCTGACGGG TGTATGGCAT GGGATGAGGG TATGTGGAAG
AACCCGGAGA TCTGGAGCCC GAGGCACCGG CTTTTTTACT ATCTGATTGC AGCATATACG
ATGTTCGTTG AAGACCTCCC CGGTCACCCG GTTGGGATGC CGTTTCCTGG CGGTCAGGTT
GTAGAAAAAC GGGGTAATGA GTACTATTGC CCCATTCGTG ACAAGGAAAA GGATGTATTC
TTCTCAATCT GTAACTTCTG TCCTGCCAGG CAGACTGATT AA
 
Protein sequence
MTDPERSKIE SIVARLAGAA NKGELGTIVA EEIQKYSVFE LQVIGGRLHL EIERLPAHYR 
HKIRSYFKDQ IFGAHHILLS RYRSGYFRKC TDQIRDPELF LSYCRMIPDG CMAWDEGMWK
NPEIWSPRHR LFYYLIAAYT MFVEDLPGHP VGMPFPGGQV VEKRGNEYYC PIRDKEKDVF
FSICNFCPAR QTD