Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1566 |
Symbol | |
ID | 3923346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 1795387 |
End bp | 1795941 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637897194 |
Product | RNA recognition motif-containing protein |
Protein accession | YP_503016 |
Protein GI | 88602838 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.306612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCAA GACGATTGTT TGTTGGAAAC CTGACATATT CCGTTGATGA GAAGCAACTA TGGGGACTCT TCTCACGGTA TGGTGAGGTT GTCGGTGTCC GTGTCATTGA AGGGAAAGGA TACGGATTTG TAGAGATGGA AAGCTATGAA GATGCACGGG CTGCACGAAA TGCCCTGAAT GAGACCGAAT TTCAGGGGAG AAATCTTCTT ATTGATGATG TAAGACCGCC GAAACCAAAG ACAGGATTCC AGCAGAGACC AGGGGGGAAA TTTCAGGGGA GAAGATCCCC ATCCACCGGA CCGGCCGGAA AACAGGGGAA GAAAGGGCCG GTACAGCAGA GAGGAGGGGC ACCACCAGGC AGGGGAGGAG CAGGGAGCGG ACGACTACGA CAGAGAGAGA CTGAGTATAC AGAACGGGTA TTAACCAGTG TAACCCGGCC ACCCCGTGAT GATAAGAAAA CTGCCATTAG GAAAAAGCCA AAGACATCAT CATCAGCAGA TGAAAAATCA TCGCCAAAGA AAAAGACCCG GTTCTGGCCA GGTGGCAGAA GGTAA
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Protein sequence | MNPRRLFVGN LTYSVDEKQL WGLFSRYGEV VGVRVIEGKG YGFVEMESYE DARAARNALN ETEFQGRNLL IDDVRPPKPK TGFQQRPGGK FQGRRSPSTG PAGKQGKKGP VQQRGGAPPG RGGAGSGRLR QRETEYTERV LTSVTRPPRD DKKTAIRKKP KTSSSADEKS SPKKKTRFWP GGRR
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