Gene Mhun_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1566 
Symbol 
ID3923346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1795387 
End bp1795941 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content50% 
IMG OID637897194 
ProductRNA recognition motif-containing protein 
Protein accessionYP_503016 
Protein GI88602838 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.306612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAA GACGATTGTT TGTTGGAAAC CTGACATATT CCGTTGATGA GAAGCAACTA 
TGGGGACTCT TCTCACGGTA TGGTGAGGTT GTCGGTGTCC GTGTCATTGA AGGGAAAGGA
TACGGATTTG TAGAGATGGA AAGCTATGAA GATGCACGGG CTGCACGAAA TGCCCTGAAT
GAGACCGAAT TTCAGGGGAG AAATCTTCTT ATTGATGATG TAAGACCGCC GAAACCAAAG
ACAGGATTCC AGCAGAGACC AGGGGGGAAA TTTCAGGGGA GAAGATCCCC ATCCACCGGA
CCGGCCGGAA AACAGGGGAA GAAAGGGCCG GTACAGCAGA GAGGAGGGGC ACCACCAGGC
AGGGGAGGAG CAGGGAGCGG ACGACTACGA CAGAGAGAGA CTGAGTATAC AGAACGGGTA
TTAACCAGTG TAACCCGGCC ACCCCGTGAT GATAAGAAAA CTGCCATTAG GAAAAAGCCA
AAGACATCAT CATCAGCAGA TGAAAAATCA TCGCCAAAGA AAAAGACCCG GTTCTGGCCA
GGTGGCAGAA GGTAA
 
Protein sequence
MNPRRLFVGN LTYSVDEKQL WGLFSRYGEV VGVRVIEGKG YGFVEMESYE DARAARNALN 
ETEFQGRNLL IDDVRPPKPK TGFQQRPGGK FQGRRSPSTG PAGKQGKKGP VQQRGGAPPG
RGGAGSGRLR QRETEYTERV LTSVTRPPRD DKKTAIRKKP KTSSSADEKS SPKKKTRFWP
GGRR