| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1562 |
|---|
| Symbol | |
|---|
| ID | 3923424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1790871 |
|---|
| End bp | 1791593 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637897190 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_503012 |
|---|
| Protein GI | 88602834 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4912] Predicted DNA alkylation repair enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0968542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCATGG ATCCGATAAT CAGCACAATT CAGAAAGAAC TGATCGGGGT GATAGACGAA
AAGACCAAAA ATAGTTACCA ACGGTTTTTC AAGGAAAAGG TGAACGCATA CGGATGTAAG
ACCGCTGCAG TATCAAAGAT AGCTAAAAAA TACTGGAAAA TAGTCAGTAC AAGAAGTAAA
CACGAAATAT TCTCTCTCTG TGAAGAACTC TATCAGTCAG GATACATGGA GGAAGCCTTT
ATTGTATCCT CCTGGGTTCC AAACCTCAAA GACCAGTTTG AACCGGAGGA TATCAAAACC
TTCAGATACT GGATTCTGAA CTATATCACC AACTGGGCAA CCTGTGACAG TTTTTGTAAC
CATTCGATGG GTGACTTTAT CGAAAAATAC CCAGAATCCA TAAATGAACT GAAAAACTGG
ACACAGTCTG AAAACCGGTG GATGAGACGG GCAGCTGCCG TATCTCTTAT CATACCGGCA
AAGCGTGGAA AATACCTTGA TGATGTCCTT GAGATTGCAG ATGCTCTCCT GACCGATGAG
GATGATATGG TCAGGAAAGG ATACGGCTGG CTCTTAAAAG AAGCAAGCAG ACAGCATGAG
GACACCATTT TTGAGTATGT TCAGGCTCAC AAGCGGGAAA TGCCACGAAC ATCACTCCGT
TATGCAATTG AGCTCATGCC AAAGGAGAGA CGGGCGGAGG CAATGAAAAA GGACTGGAAA
TAG
|
|---|
| Protein sequence | MFMDPIISTI QKELIGVIDE KTKNSYQRFF KEKVNAYGCK TAAVSKIAKK YWKIVSTRSK
HEIFSLCEEL YQSGYMEEAF IVSSWVPNLK DQFEPEDIKT FRYWILNYIT NWATCDSFCN
HSMGDFIEKY PESINELKNW TQSENRWMRR AAAVSLIIPA KRGKYLDDVL EIADALLTDE
DDMVRKGYGW LLKEASRQHE DTIFEYVQAH KREMPRTSLR YAIELMPKER RAEAMKKDWK
|
|---|
| |