Gene Mhun_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1560 
Symbol 
ID3923422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1788028 
End bp1789194 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content50% 
IMG OID637897188 
Productradical SAM family protein 
Protein accessionYP_503010 
Protein GI88602832 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.101502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.842747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC CTTTCCATAT CATGCTTATC CCGACCCTTG GCTGCCCGTC CAATTGTAAA 
TACTGCTGGA GTTCTGAAGA AGGATCTCCG GTGATGAATA TTCAGGTTGT GAAGGACGTC
GTATCCTGGC TTTCAGATTT TCGGGATGAT CCGGTCACGA TAACATTTCA TGGCGGCGAG
CCTCTTCTTG CCGGACCTGA CTTTTACCGG CAGGCTCTGC CTCTTCTTGC TCAGGGTCTT
GCGAAAAATA AACCCTCATT CGCGATTCAG ACAAACCTCT GGCGGATGAC TCCGGAACTT
GCGGACATCT TTGCAGAATA CCATATTCCC ATCGGGTCTA GTATTGATGG TCCTGAGGAT
ATTACTGATT ATCAGCGGGG AGACGGGTAT TTTCAAAAAA CTATGGCAGG GTACCGGGTT
GCACGGGAGC ATGGCCTGAA TATCCGGTTT ATCTGCACGT TTACCGGTTA CTCTGAAAAA
CAGCGGGAAT CTATCGTGCA GTTCTTCATC GATCAGGGCT TTACCATGAA ACTGCACCCG
GCACTTCCTT CATTACGAAG TGAGAGCCCG AACGAGTGGG CCCTGGCCCC GGAGAAATTT
GGCGATCTCC TGGTTTACCT TCTGGATCAG TCACTTGACC ACTATCATGA GATTGATATT
ATGAATATCA ATGACCTGGT CAGGTGTGTC TTTACGAGAA GAGGGAATGT CTGCACCTTT
GCCGATTGTA TGGGGAACAC CTATGCCATT GGTCCTGACG GGAGTATCTA TCCCTGTTAT
CGGTTCGTGG GGATGGATGA GTATGTCATG GGCAATGTCC GTGACCGGCC GACGCAGAAG
GATCTTGATG AGTCAAAGCC TGGCAGACTC ATGAATGATT TCAAGGCCTA CGTGGATACC
CATTGCTCAT CCTGCTCCCA CAACAAATAT TGCCGGGGGG GATGCCCCTA TAATGCGATT
GCCCCGTCCG GAGGGGAGAT AACCGGTGTT GATCCTCATT GTATCGCATA TAAGCGGATA
TTTGATGAGA TCACCGACCG GATGAATACC GAGATGTTTG AAGCTCCTCC GATGTTCGGG
GGTTTTGGAC CTGGGCAGAC CGGCACCGGT ATGGGAAAAA CAAAACCTGG AATCATGGCT
CTCATGCAGA AGATTGCTCT GCAATAA
 
Protein sequence
MKTPFHIMLI PTLGCPSNCK YCWSSEEGSP VMNIQVVKDV VSWLSDFRDD PVTITFHGGE 
PLLAGPDFYR QALPLLAQGL AKNKPSFAIQ TNLWRMTPEL ADIFAEYHIP IGSSIDGPED
ITDYQRGDGY FQKTMAGYRV AREHGLNIRF ICTFTGYSEK QRESIVQFFI DQGFTMKLHP
ALPSLRSESP NEWALAPEKF GDLLVYLLDQ SLDHYHEIDI MNINDLVRCV FTRRGNVCTF
ADCMGNTYAI GPDGSIYPCY RFVGMDEYVM GNVRDRPTQK DLDESKPGRL MNDFKAYVDT
HCSSCSHNKY CRGGCPYNAI APSGGEITGV DPHCIAYKRI FDEITDRMNT EMFEAPPMFG
GFGPGQTGTG MGKTKPGIMA LMQKIALQ