| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1492 |
|---|
| Symbol | |
|---|
| ID | 3922723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1712932 |
|---|
| End bp | 1713807 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637897123 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_502945 |
|---|
| Protein GI | 88602767 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.944504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAGG GTGTTTTCCC CGCTTTGATT ACTCCTTTTC AAAGAAATCA CGGAAAGAAT
CTGGACCTTG ATGGCCTTCG TTCCAACATA GCGCACCTCG TTGCCGCAGG GGTTCATGGT
GTTGTTCCCT GTGGTTCAAC CGGTGAATCT GCAACTCTTT CTTTTGCCGA ACACGAACAG
GTCGTCGAGG TTACTATGGA TGAGGCAGGC GGAAAGGTTC CTGTCCTTGC CGGCACTGGA
TCCAACAACA CTTCTGAAGC GCTCCGGTTT ACACGGGCTG CAAAAGATGT CGGAGCAGAT
GGTGTCCTTG TCATCAGCCC GTATTATAAT AAGCCAAACA GGTCAGGTCT TATTAAGCAT
TATACCGCTA TTGCAGACCT GGATATTCCT GTGGTTGTCT ATAATGTCCC TGGCAGAACC
GGGCAGAATA TTACTCCGGA TATTATAGCA GAGCTGGCAA AACACCCAAA CATCGTAGGA
GTCAAGGAGG CATCAGGAGA CCTTGGTCAG ATATCAACCA TCATTGAACT GACGAGAGAC
GAAGATTTCG CCGTTATCTC CGGCGATGAC AACCTGACGC TTCCAATCCT CTCCCTGGGC
GGGAAAGGAG TCATATCCGT TGCAGCAAAT ATCTATCCCC GCCCCCTGAT TGAGATGTAT
GAAGCAGCAC AGAAGGGAGA CTACGAGACT GCACGGGAGA TCCATTTCAA ATATTCACCC
CTCTTCCGGG CGATGTTTTA TGAGTCAAAT CCGATCCCGG TAAAGAAGGC CGCAGAAATT
CTGGGAATGG CTGCAGGACC ACTTCGTCTG CCCCTTGACG AGGCATCAGA GCAGACAACA
GAAAGACTCA AAGAGGTTTT ATCCAGATAT GATTAA
|
|---|
| Protein sequence | MFEGVFPALI TPFQRNHGKN LDLDGLRSNI AHLVAAGVHG VVPCGSTGES ATLSFAEHEQ
VVEVTMDEAG GKVPVLAGTG SNNTSEALRF TRAAKDVGAD GVLVISPYYN KPNRSGLIKH
YTAIADLDIP VVVYNVPGRT GQNITPDIIA ELAKHPNIVG VKEASGDLGQ ISTIIELTRD
EDFAVISGDD NLTLPILSLG GKGVISVAAN IYPRPLIEMY EAAQKGDYET AREIHFKYSP
LFRAMFYESN PIPVKKAAEI LGMAAGPLRL PLDEASEQTT ERLKEVLSRY D
|
|---|
| |