| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1487 |
|---|
| Symbol | |
|---|
| ID | 3922718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1709370 |
|---|
| End bp | 1709993 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637897118 |
|---|
| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
|---|
| Protein accession | YP_502940 |
|---|
| Protein GI | 88602762 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0293] 23S rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCAC AATGGGGCAA AGATAAAGCG TATCTGAAAG CAAAACAATC AGGGTATCGT
TCGCGTGCGG CGATGAAGCT GAAGGAGATC ATTCAGAAAA ACCCGGTTAT TCGTCCGGAT
GATAATATCC TTGACCTTGG TGCAGCTCCC GGGAGCTGGC TGCAGGTTTT GCGTGAAATG
ACAAATGGTG TTATTGTCGG TGTTGATCTC AATCCCATTC TGCCCATCGA AGGGGTCAGA
ACCATCATCG GTGATTTCTC TGATCCGGTA GTAATTGCAC AGATTCGGGA ACTTATGCCT
GAAGTGAATG GGATTGTGTG TGATGCATCA CCAAAGCTCT CCGGCCAGCG GTCATTTGAT
CAGGCAAGAG CTATCGAGCT GAATGAGATG GCGCTCGGTG TCGCACGGCA GCTCCTCAAG
CAGGGCGGGA ACATGATTAT GAAGTCATTC CAGGGAGAGG ATTTTAGCTG GCTGTATAAC
CGGGTAAAAC AGGAATTTTA CTCGGTACGG ACATATAAGG CGCATACCAC CCGCAAAGGA
AGTACTGAAA TGTATATCAT TGCGAAGAAT TTCATCGGCA CTCATCAGGG GTTAGAGGAG
TCAGTTTCAG ATGGATCTGC ATGA
|
|---|
| Protein sequence | MGSQWGKDKA YLKAKQSGYR SRAAMKLKEI IQKNPVIRPD DNILDLGAAP GSWLQVLREM
TNGVIVGVDL NPILPIEGVR TIIGDFSDPV VIAQIRELMP EVNGIVCDAS PKLSGQRSFD
QARAIELNEM ALGVARQLLK QGGNMIMKSF QGEDFSWLYN RVKQEFYSVR TYKAHTTRKG
STEMYIIAKN FIGTHQGLEE SVSDGSA
|
|---|
| |