| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1480 |
|---|
| Symbol | |
|---|
| ID | 3922182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1699559 |
|---|
| End bp | 1700200 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637897111 |
|---|
| Product | cobalt transport protein CbiM |
|---|
| Protein accession | YP_502933 |
|---|
| Protein GI | 88602755 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATTC CAGACGCATT TATTCCACTT CCTCAGGCAG CAGTCTACTG GATTATTGCC
CTTGTATTTC TAGCCCTTGC TATCCGGTGG GCACGGTCTG AATTAAACGA GGATAAAATC
CCCCTGATTG CAGTCCTTGC AGCCGGCATC TTTGCACTGC AGAGTTTTAA TCTACCGGTT
TCGATGGGAA CTAGTGGTCA TCTCGTGGGT GGTGCCCTGG CAGCCATTGT TCTCGGGTCA
CCGTTTGCCG CAGTCTTTAT CCTGACACTT GTTCTTATCA TCCAGGGTTT TATTTTCGGG
GATGGCGGTA TCACCGTCAT GGGTGCGAAT ATCCTGAATA TGGGTGTTAT AGGTGGATTT
GTAGGGTATT ACACATTCCA GGGTCTGTTA AAAGTTGTGA AAAATCCATA TCTCTCAAGT
GCGGTTGCAG CATGGCTGGC CTGTCTTATC CCGGCACTTG CCTGTGCAGT TGAGATGTCC
ATTGCAGGGA CCTTCCCGCT GGTCCCCGGA CTTGTTGCTA TGGGAATCTA TCATGCAATT
ATTGGTGTCA TTGAAGGGGT AGTGACTGCG GTCATCATCT ATGTTCTTGC CATGGCTCGT
CCTGATCTTG TTGATACCTC TGTAGGAGTT GCATCAGTAT GA
|
|---|
| Protein sequence | MHIPDAFIPL PQAAVYWIIA LVFLALAIRW ARSELNEDKI PLIAVLAAGI FALQSFNLPV
SMGTSGHLVG GALAAIVLGS PFAAVFILTL VLIIQGFIFG DGGITVMGAN ILNMGVIGGF
VGYYTFQGLL KVVKNPYLSS AVAAWLACLI PALACAVEMS IAGTFPLVPG LVAMGIYHAI
IGVIEGVVTA VIIYVLAMAR PDLVDTSVGV ASV
|
|---|
| |