Gene Mhun_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1460 
Symbol 
ID3922068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1681545 
End bp1682744 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content52% 
IMG OID637897091 
Productaminotransferase, class I and II 
Protein accessionYP_502913 
Protein GI88602735 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGTA CGAATGCCGG CCCTGTATAC CGGTTTTCTT CCTGCATGCA TATCCTTCCG 
CCCTCATTTC TGGATGAACT CTTCAGGGTA TCAGCCGTGC CCGGGATCAT CTCTTTTGCA
GGCGGACTTC CTGATGCATC ACTCTTTGAT CTACAGGGAA TCAGGCAGGC AACAGAAGCA
GTCTTTGATG AGCATGGGAG AGCAGCCCTT CAGTATACCA CCACCGACGG GTATCGTCCC
TTACGGGAGA TAATTGCCCG CCGGTATTAT ACGCGGCTGG GACTTTTGGT CAGCGCTGAC
GAGATACAAA TAGTAAATGG GTCACAGCAG GCTCTTGACC TTATGGCAAA AATACTGACC
AGCCCTGGAG ACTCGATCCT AATCGAACGC CCCGGATATC TGGGTGCCAT CGAAGCCTTT
TCATTTTATA GCCCTGTTTT TTCTCCGGTT CCGCCCGATG ATGAGGGACC TGACCCTGAC
TATCTTGCCA ATATCATCAG GACAGAAGAC CCGGTTTTCT TTTACGGGAT TCCGAATTCA
CAAAACCCGT CAGGATGTAC CTGGTCAGAT ATGCGACGAA GGGAGGTGGC TGACATCCTC
TCCGGAACTG ACTGTCTGCT CTATGAAGAT GATGCCTTTG GAGAACTCTT CTTTGACGGA
AAGCCACGCC AGCCGGTGAT GAAACACCTG CCAGACCAGG TCATGATGAG CGGATCATTC
TCAAAAGTAG TCGCCCCGGG ACTTCGCATC GGATGGATTC GGGCACCCAG ACCTGTTCTG
GCCGCATTTA ACCGGGCAAA GCAGGCAGCA GATCTCCACT CAAATCTCTT CTCCCAGATG
GTCCTGACCG AGTATATGAC CAGAAATAAT CCTGATGAGA AGATACGTGC GATGGGACGG
GAGTATGGAG AGCGATGCCG GCTCATGACC GACCTTATTG AGGATATGCT GCCCGATACC
GTCGGTCACA CGAATCCTGT CGGTGGGATG TTCCTGATGC TGACCCTCCC GGATTCCATG
CATTCGATGG AGATATTTGA GAAGGGTATT CAGGAAGGGG TTGCAGTAAT GCCCGGTGTT
CCCTTTTATG TTGATGACGG CGGATGCAGA ACCATCAGAC TGAACTTCTC TGCCTCCTCG
AAAGAGCAGA TAGAGGCAGG TATGAGCCGC CTTGCCCGGG TGTTTCGGGA TATGGCATGA
 
Protein sequence
MTGTNAGPVY RFSSCMHILP PSFLDELFRV SAVPGIISFA GGLPDASLFD LQGIRQATEA 
VFDEHGRAAL QYTTTDGYRP LREIIARRYY TRLGLLVSAD EIQIVNGSQQ ALDLMAKILT
SPGDSILIER PGYLGAIEAF SFYSPVFSPV PPDDEGPDPD YLANIIRTED PVFFYGIPNS
QNPSGCTWSD MRRREVADIL SGTDCLLYED DAFGELFFDG KPRQPVMKHL PDQVMMSGSF
SKVVAPGLRI GWIRAPRPVL AAFNRAKQAA DLHSNLFSQM VLTEYMTRNN PDEKIRAMGR
EYGERCRLMT DLIEDMLPDT VGHTNPVGGM FLMLTLPDSM HSMEIFEKGI QEGVAVMPGV
PFYVDDGGCR TIRLNFSASS KEQIEAGMSR LARVFRDMA