| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1449 |
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| Symbol | |
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| ID | 3924507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1669412 |
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| End bp | 1672615 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637897080 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_502902 |
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| Protein GI | 88602724 |
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| COG category | [N] Cell motility
[R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATGG CGTTCCTCAA AAAGGATCAG CAGGACCGTG CGTACTATGC ATTCAAAGAA
GGTCTTCGCA TCGATCCTGA AAACTCAGAA CTCTGGTATC AGACCGGAAT AGTTCTGGCA
AAGCAGGAGC GTCACCGGGA TGCCATGAAG ATGTACCGGA ACGCTCTGAA GTACGATCCG
GATAATCTGC AGGCCCAGCT TCGCCTTGGT ATGTCGATGC ATGAAGTCGG CATGTATAAA
GAGGCCATCC CTGTTTTAAC CCGGCTTGTC GAGCGTGAAT CTGAGAATGA TCAGGGATGG
ATGTACCGGG GTGCCTGCTA TCTTGCACTT GGCAAGTTTC GTGAAGCTCT CACCGACCTT
GACATGGCGA TTGACTGGGG GGCGGAACAG GCGGAAGTCT GGGTTTTAAA AGGCTATTGT
CATGTCCAGC TTGGAGAATA TACCGACGCA CTTGATGCCT ATTACTTTGC CATTGAGATA
AATCCAGATG ATCCGGTTGC ATTTTTCGGC CTTGCAAACA CTCTTGTCCA TCTTGAAGAG
CGGGAACAGG CGATCGATGC CCTGAAAAAA GCCCTAAAGA TCGATCCGGA CTATGCTGAT
GCCTGGCGAA TGATAGCAGA CCTGCTTGCA GATTCAGGTG ATATCCCTCA GGCTACCAGT
GCATATGAGC ACGTGCTGAA GCTTGAACCC TGGGATCTTG ATACCCGGTA CTCGTACTCA
ATCCTGAAAG CCGAGTTATC TGATGATAAG GCTGCCGTCA CCGATATATT AAACCAGATC
ATCAATGAAG GCCAGGAGTC GGTCACCTTT TACAATAATC ATGGCCTTAC TTTGATGCAT
CTGAAGAAGT ATGATAGTGC TCTCCAGGCA TTTAACCGGG CATTGCAACT GGGAAAAGAC
AATCCCTCCG TCTGGCATAA TCATGGTGCT GCCCTCTATA AACTTAAATG GTACAAGGAT
GCCATGAAAT CCTTCCAGCA GTCCTTAAAA CTCAATCCGA AAAATGTCAA CTCCTGGGTT
GGTATCGGAA TGGTCGCCGT TGCCCAGTAT GAATTCAGCC GGGCAGCAGC TGCATACACC
CATGCAGCCC AGCTCAGTCC CCGGAAAGTA AACATCTGGA TCATGCTTGG GGATACCCAG
ATTGAACGCG GACAGTACCA GGAAGCAATT GCTGCATATG AAAAAGCCCT GGAACTTGAT
CCTGAAAACC CAACCGCCTG GAATCAGCGT GGACTTGCTC TCCGGCTGCT TGACAGTCAC
CCGGCGGCTC TTGAATCATT CGAACATGCT GCAGAGACAA AGAATGCAAA GCCGGAGTCA
TGGATTAACC ATGCGATTAC CAGCTTTGAG CTGGGAGAAT ATCATCAGTC GGTTCATTCG
TTTGAGCGTG CATGTAAATT CGGTCCGATC CCCTCTGACA GCTGGCTGAT ATACCTGAAT
GCTCTGGCCT ATGAACATGA AAACCAGAAA CTTATCAAGG CATCAGAGCG GTTTATTGAA
TTGTTCGGAC CTGATGCAGA GGTTCTCTTC CTTCTTGGTG TTGCCCAGTA TGAGTTGAAA
CAATATGAGG CAGCCCTGCA TCATTTCAGA GAGACATTAA AGCTGGACAA GGACCATACT
GATGCCCTTT TCTGGGCCGG TCTGACCCTC CTTGAGCTCT ATCAGTTTAC CGAGGCAATA
ACCGCATTTG AGGGAGTGGA AGATAATCAT CCGGATGATG ATCAGGCCTG GTATTATCAT
GGGAAGGCAC TTGTCGCATT ACATGAACTT CAGAAAGCAG AATTTATTCT GAAACATTCG
CTCCAGTTAA ATGATCAGTC TGCTGATGCC TGGTATCTGC TTGCGGATGT CCAGCATACC
AGGAAGGCGT ATGCAGATGC CCTGCAGTCT GTTGGAAAGG CCCTTGATCT CTCTCCGTCA
AACAATGAGA TATTAAAACT GAAGGCAAAG ATCCAGGTTG CTCTGGGTTC ATTCCGGGGT
GCCTGTCAGA CATATGCTGC CATCAGTGAG CCTGATGCGA GTGATACTGA GGTTCTTACC
GGATACATGC GTGCTTTGTA TCACACCGGT CAGTTCAGGG AAGCATATAG TCGTGTCACC
CGCCTGCTGG TCAAGGATGA GAAGAATCCT GATCTCTGGA GGATGCGGGC AGAGATTGAA
CGTGCCCAAG GGTTGTTTGA TGAGGCTGCG AATGCTCTTA CTGAGGCGTG TAAATATGCC
CCGAATAATA AAAAACTCTT ATCTTTGCAG GCGATTGTCC TCTATGAAGC AGAGAAATAT
CCGGAGGCCA TATCGGTTAT CGACAAGGTC CTCGGGTTTG ATCCGCTGAA TGGTGAGTTA
TGGAAACGGA AAGGGGCGGC CCATGATAGT CTGCAGCAAT ATGATCAGGC TTGTGAATCC
TACCTGAAAG CAGCAGAGTT CCTACAGGAT GATCCAGATC TCATACGAAA ACTGGGGGTA
GCCCTGTATA AGACCGGGAA ATGTGACAAG TCTCTTCCAC GGTTTGACCA GTATCTTGAA
GTGGTTCCGG ATGATCCTGA GATCTGGGAG ATGAAAGGGA AGGCTCTGTT TCATCAGGGG
AAGTATGAAT CTGCAAGTGC TGCCCTCTCC CAGGCGATCC TTTATCGTCC GGATGATATG
GATCTTCTCT TCAGGTATGC ACAAAGTCTG ATTAAATCCG GTGAGTTGCT GACGGCAATA
CCTCCGCTGG ATCAGGTTAT CGAACAGAAC CCGGAGAATG CCGAAGCCTG GAAATTGAAG
GCAGAGATTG AACAGACGCT TGGGAGAGAG GATGAAGCAG CTCAGGCGGT GGAAGAGGCA
CTCCGGCAGA TCCCTGATGA TCCCGGTCTG ATGCTGGCAA GGGTAAAATC CCTCTATGAG
GCTGATTCAT ATGCAGAAGG ACTGTCACTT GTTCGCCGGC TCATTGATAA AACTCCGGAG
AGTACTGAGG CATGGTCGTT GTATGCAGAG CTGCTCTGGA TGACTGCAGA TCATAATGCC
GCTGCGGCAG CATTTGACCG GATTCTGGCT CTTGATGATA CCAATGCCAA AGCCTGGTTT
TTAAAAGGGG ATTCGTTACA AAATGCAGGC CGGTTTGAAG AGGCTGCCGT TGCCCATGAG
CGGGCGTTCT CTTTAGGTGG TGACCCTTCT GTCGGACTGA TGCTCTCAAG GAAGATGCGG
TACCTACAGC AGAAGAAGGC CTGA
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| Protein sequence | MGMAFLKKDQ QDRAYYAFKE GLRIDPENSE LWYQTGIVLA KQERHRDAMK MYRNALKYDP
DNLQAQLRLG MSMHEVGMYK EAIPVLTRLV ERESENDQGW MYRGACYLAL GKFREALTDL
DMAIDWGAEQ AEVWVLKGYC HVQLGEYTDA LDAYYFAIEI NPDDPVAFFG LANTLVHLEE
REQAIDALKK ALKIDPDYAD AWRMIADLLA DSGDIPQATS AYEHVLKLEP WDLDTRYSYS
ILKAELSDDK AAVTDILNQI INEGQESVTF YNNHGLTLMH LKKYDSALQA FNRALQLGKD
NPSVWHNHGA ALYKLKWYKD AMKSFQQSLK LNPKNVNSWV GIGMVAVAQY EFSRAAAAYT
HAAQLSPRKV NIWIMLGDTQ IERGQYQEAI AAYEKALELD PENPTAWNQR GLALRLLDSH
PAALESFEHA AETKNAKPES WINHAITSFE LGEYHQSVHS FERACKFGPI PSDSWLIYLN
ALAYEHENQK LIKASERFIE LFGPDAEVLF LLGVAQYELK QYEAALHHFR ETLKLDKDHT
DALFWAGLTL LELYQFTEAI TAFEGVEDNH PDDDQAWYYH GKALVALHEL QKAEFILKHS
LQLNDQSADA WYLLADVQHT RKAYADALQS VGKALDLSPS NNEILKLKAK IQVALGSFRG
ACQTYAAISE PDASDTEVLT GYMRALYHTG QFREAYSRVT RLLVKDEKNP DLWRMRAEIE
RAQGLFDEAA NALTEACKYA PNNKKLLSLQ AIVLYEAEKY PEAISVIDKV LGFDPLNGEL
WKRKGAAHDS LQQYDQACES YLKAAEFLQD DPDLIRKLGV ALYKTGKCDK SLPRFDQYLE
VVPDDPEIWE MKGKALFHQG KYESASAALS QAILYRPDDM DLLFRYAQSL IKSGELLTAI
PPLDQVIEQN PENAEAWKLK AEIEQTLGRE DEAAQAVEEA LRQIPDDPGL MLARVKSLYE
ADSYAEGLSL VRRLIDKTPE STEAWSLYAE LLWMTADHNA AAAAFDRILA LDDTNAKAWF
LKGDSLQNAG RFEEAAVAHE RAFSLGGDPS VGLMLSRKMR YLQQKKA
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