Gene Mhun_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1447 
Symbol 
ID3924505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1666826 
End bp1668682 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content52% 
IMG OID637897078 
ProductPT repeat-containing protein 
Protein accessionYP_502900 
Protein GI88602722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGAAA GGGGTAGTAT GAGGGCATGG GTACCGGGTA TCCTGATCAT TCTTATGTTC 
TGTATGATCC TTCCATCCTG TTGTAGTGCA GGAAATCCTG TTCAGCAGGT GCAGAACCAG
GTTGTGATCT TTTCCGGTCA GATTCCATAT GGGGATGGAA ATGTGTCAAT TCGGGCTGAT
TCAGGGGCTT TGTATCAGAT TCCTGCTATG ACACCGGTGG GGATTATCCA GGCACTGGCC
GGGACTGGTA TGATTTCCAG TTATCGGATT GGGGATGAGC TGATTGATAA ACGGGGTATT
TTCACCCTTG ACGGGGTAAA TTCATATCAG GTGACTGAAC ATGATGCCTG GTTTGTCCTG
GTGAATGGTG TTCAGCTGAG AGAATACCTT CTTCCTTCTG TAGAAGGTCT GAATACCTAT
CTCCTGAAGG ATGGAGATGA CGTTCTTTTC GCGTACGGTG ATCCGACCCT GCCTGCCAGT
GCTGCAAAAG CCCTTATCTG GGTTCAGGTG GGGAGCAAGA ATGGGGTGAT GCAATTTGTC
TCTCCTTCTG CCATGATGGG TCAGTATGTT ATTTCACAGA TGCCTGTCGT ATCAACCCCC
GTTCCCACCG TGGTTCCGGT TGTAGAGGCC ACCGCTGTTC CGAGTCCTGT TCCCACTGCT
GTTCCGGTTG TAGAGGTCAC CGCTGTTCCG AGTCCTGTTC CCACTGCTGT TCCGGTTGTA
GAGGTCACCG CTGTTCCGAG TCCTGTTCCC ACTGCTGTTC CGGTTGTAGA GGTCACCGCT
GTTCCGAGTC CTGTTCCCAC TGCTGTTCCG GTTGTAGAGG TCACCGCTGT TCCGAGTCCT
GTTCCCACCG TGGTTCCGGT TGTAGAGGCC ACCGCTGTTC CGAGTCCTGT TCCCACCGTG
GTTCCGGTTG TAGAGGTCAC CGCTGTTCCG AGTCCTGTTC CCACCGTGGT TCCGGTTGTA
GAGGCCACCG CTGTTCCGAG TCCTGTTCCC ACCGTGGTTC CGGTTGTAGA TGCTCCTGCC
GTTCCGAGTC CTGTTCCCAC TGCTGTTCCG GTTGTAGATG CTACCGCTGT TCCGAGTCCT
GTTCCCACCG TGGTTCCGGT TGTAGATGCT CCTACCGTTC CGAGTCCTGT TCCCACTGCT
GTTCCGGTTG TAGATGCTAC CGCTGTTCCG AGTCCTGTTC CCCCTGTGGT TCCGGTTGTA
GATGCTACCG CTGTTCCGAG TCCTGTTCCC ACTGCTGTTC CGGTTGTAGA TGCTCCTGCT
GTTCCGAGTC CTGTTCCTAC TGCTGTTCCG GTTGTAGATG CTACCGCTGT TCCGAGTCCT
GTTCCCACTC CCCTGGCAGA AGTTCCCCTG GTTTTGACAC CCACGAAGGA ACCGGTGAAT
GAAACCGGAA ATATTTCCAA TATCACGGAT CTGGTTGAAG AACTCCCTAA ACCAACACCC
GCTGCAGAGA AAGAGGATAA CCGGATGCTC TATTCAGGTG TACTTGCCCT CCCGGAGGGA
ACAGTTAATG TCACGGATAG TTCTGGGATT GAGTACGAGA TACCGGTGAA CACCCCGCTC
GGGGTCCTTC ACATGCTTCT TATAGATAAA AAGATACAGA ATCTGTGTAT AGATGACCGT
GGTATGCATA AGGGAGGCAT CTTAATTCTG GAAGGAATTA ATGAATTTTT CAACACAGCA
ACAAAAGTGT GGTTTGTCAG AGTAAATGGA GAACTTCTGG AAGATTATGC AGAACCAAAA
ACCGATGGTC TGAATCTCTA CTTACTCATG GCCGGAGATA CTGTCTCATA TTATTACGGG
AATCCCACCG GATCACTGCA GGATGCAGAA GCAATGCTAG TTGTGACACT TGGGTAA
 
Protein sequence
MRERGSMRAW VPGILIILMF CMILPSCCSA GNPVQQVQNQ VVIFSGQIPY GDGNVSIRAD 
SGALYQIPAM TPVGIIQALA GTGMISSYRI GDELIDKRGI FTLDGVNSYQ VTEHDAWFVL
VNGVQLREYL LPSVEGLNTY LLKDGDDVLF AYGDPTLPAS AAKALIWVQV GSKNGVMQFV
SPSAMMGQYV ISQMPVVSTP VPTVVPVVEA TAVPSPVPTA VPVVEVTAVP SPVPTAVPVV
EVTAVPSPVP TAVPVVEVTA VPSPVPTAVP VVEVTAVPSP VPTVVPVVEA TAVPSPVPTV
VPVVEVTAVP SPVPTVVPVV EATAVPSPVP TVVPVVDAPA VPSPVPTAVP VVDATAVPSP
VPTVVPVVDA PTVPSPVPTA VPVVDATAVP SPVPPVVPVV DATAVPSPVP TAVPVVDAPA
VPSPVPTAVP VVDATAVPSP VPTPLAEVPL VLTPTKEPVN ETGNISNITD LVEELPKPTP
AAEKEDNRML YSGVLALPEG TVNVTDSSGI EYEIPVNTPL GVLHMLLIDK KIQNLCIDDR
GMHKGGILIL EGINEFFNTA TKVWFVRVNG ELLEDYAEPK TDGLNLYLLM AGDTVSYYYG
NPTGSLQDAE AMLVVTLG