| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1423 |
|---|
| Symbol | |
|---|
| ID | 3924086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1640195 |
|---|
| End bp | 1640764 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637897055 |
|---|
| Product | CheW protein |
|---|
| Protein accession | YP_502877 |
|---|
| Protein GI | 88602699 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.797772 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.101367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACAT ATAGTGTTGA AATATCAGCC GATGCAGTGC AGGAGGAGCA GATATCCTCC
GTTCCTGCTC ATTCATCCAA TTGGAACAGA GTAAAACGGG CTGGAACAAT CCAGGTCGTG
GAATTTATTC TGGGAAAAGA GATGTTTGCA ATCGATCTCT TTGATACACG GGAGGTCATT
ACCCAGACCG AAGTAACTCC CCTTCCCAGT ACCCCTGATT ATCTGAAGGG AATAATAGAT
CTCAGGGGAT CGATCACAAC CATTGTGGAT CTCAAAGGGC TGATGCATAT CACCACCGAA
TCAGCGGGTA AGAAAAATTC GCGGATTATC GTCCTTGATC GGTCCATTAC CAGCAAACCA
ATCGGGATCC TGGTAGATGA TGTCTTCTCC GTCACCACGT ATGGACAAGA AGACATCGAC
CGCGAGAACA CCTCATCCAG CGACACGCAC CGGGACATCA TCGGAGTCAT CAGGAAGAGA
ACAAAAAATG CCGGTGAGAA AGATAAGGGC GGGCTTGTTG TCTGGCTTGA TATCAGGAAG
ATGATCGGAA AGATAGAAGA AGAGTTGTAA
|
|---|
| Protein sequence | MGTYSVEISA DAVQEEQISS VPAHSSNWNR VKRAGTIQVV EFILGKEMFA IDLFDTREVI
TQTEVTPLPS TPDYLKGIID LRGSITTIVD LKGLMHITTE SAGKKNSRII VLDRSITSKP
IGILVDDVFS VTTYGQEDID RENTSSSDTH RDIIGVIRKR TKNAGEKDKG GLVVWLDIRK
MIGKIEEEL
|
|---|
| |