| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1415 |
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| Symbol | |
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| ID | 3923558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1618669 |
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| End bp | 1624887 |
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| Gene Length | 6219 bp |
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| Protein Length | 2072 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637897047 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_502869 |
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| Protein GI | 88602691 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.384608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.53452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGT CGCATCGTTC CCCCATACAT ATGACCACCA TACTCTATAT CGATGATGAA
CCCCTGGTTG CCGATGCATC CGTCCGCTTT TTAACACATT CCGGATTTGA AGTAGATAAA
GCCTTATCAG GCAGAGAAGC CCTGGAAAAG TTACGGGCAG GAAGATATGA TGCTGTCATA
TCTGATTATC ACATGCCTGG AATGACAGGT ATTGAGTTAT TAAAAATAAT CCGGTCAGAT
ATTGGAGATA TACCATTCAT TCTCTTCACC GGGAAGGGAA GAGAAGAGGT CGTTATTGAG
GCGATTGAAC ACGGGGTTGA TTATTATGTG CAAAAAGGTG GCACCCCAGG CCCGTTGTTT
GCCGATCTCA CCCATAAAAT CAATATTGCA ATACAACGTC GTGAATCAGA ACGGTTATTG
CGGATAAATG AGAAGCGACT CAGGAAAGCC CAGGAGATTG GAAAGATAGG ATGCTGGGAA
CATGCTGTCG GTTCAGATGT CTTGTGGATG TCTGAAGAAG CACTCCGGTT ATACGGGATG
GACGGGCCTT CCCGAAATGT TTTGATATCT GATATTTTTG CCTGTATCCG TGAGCAGGAT
AAGGTTGAAA AGGCATTTCG CAATCTTATC GAAACCAGGG CGGATTTTCA TATAGAATAC
TCCATCATTC CAGTCAATAA TACAGCCCCC AGAATCCTTC TTTCGATAGC AAGTGTTGAG
GAGGATGATC CAGGCACTGG CAGACGGATC GTCGGTATAA CCCAGGATAT CACCGAGAAG
AAGAATTCAG AATGGCGTCT TACCAAAAAG AATGCCGATC TGACTGCAGC ACTTGACCGG
TTAACAAATG CAGAGGAGAA ACTGACCCAC CAGCTCGAAG AGATTCGGGC CGCTCATGAG
AAGATATCGG AAAGCGAGGA GAAGTATCGC AAACTCTTTG AAGAAAATAT CGTTGGGACC
GCGGTACATG AGATCATCTG CAATGAGTCC GGTGCTCCGG TTGATTACCG GTTTCTTGAT
GTAAACCCGG CTTTTGAACA GATAACCGGA CTTGTTGGGG ATGAGATCCG TAATAAGACG
GTTCTTGAGG TCCTCCCTGA CACTGAGCCG TACTGGATAG ATATATACGG GAGGGTCGCA
CTGACCGGTA AACCTGCCCA TTTTGAGCAG TTCAGCCGCG AGCTTCAAAA ATACTTTGAA
GTCTTTGCAT ATGCTCCACA GATCGGCCAA TTCGTCACCC TCTTTCAGGA CATCACGGAA
CGGAGGAGAC GTGAGAACAG TCTGAATGAG CTTAATGCAT ATCTTGAAAA CCTGTTTGTA
TATTCAAATG TTCCGATTAT CGTATGGGAT CCTGAAGGTA TTATAAGCCG AATCAATCAT
TCGTTTGAAA TTCTCATCGG AAGACCACGT GATGAGGTCA TAGGAAAACC GCTTGACATT
CTCTTTCCTG AAAGAGATGC AGAATATGCC ATGCGGCTCA TCCAGACAAC CCGTGACGGA
GTCAGGTGGG AGACAGTTGA GATACCAATT CTTCATGCCG ACGGAACAAT TCGGGTGGTT
ATATGGAATT CTGCAACCAT TTATGCCGCT GACGGGAAGA GTCCCATTGC AACCATAGCA
CAAGGCAGGG ATATCACCGG GGAAAAACTC CTGGAGAAAG AGAAACAACA GGCGATGAAT
AAGATCCAGG AGAACATTGC AAAACTTGCC ATTCTGAACG ATGGGATCAG AAACCCCCTG
ACCATCATCT CAACCTATGC AGATATGGCA GATGATGATG ACATCGCCAA AAACATCCAT
GCTGAAGTGA TGCGGATAGA TGCGATGGTA AATACCCTGG ATAAGGAATG GGTCTCCTCT
GAGAAGATTC TGAACTATCT TCGAAAACAG GATAAAATAA CGCCTGATTT CAAACCGGTA
CTATCAGAGG CCCAACCCGA CTTCGATACC CGTCTCTCTA CACCCTCAGG TCAGGAGCAT
ATTCTGCCGG TCGTGTCGTC TCAAAATCTC TTCATTGAGG AGATCCAGGC TCAACTCTAT
GCTATCCTTG ACAGCATTGA TGCATTCGTC TATGTCGCGG ATATGGAGAC CTATGACATT
CTCTACATGA ATGAACGGGG ACGGGCTCTT TTTGGTAATG TACACGGACA AAAATGCTAT
TCCCATATCC GTGCCCATTC TGAAGGCCCA TGCCCGTATT GCACCAATCA CCTCCTCCTC
TCCAACCAGA AACCAACCGG AGTCTGCCGG TGGGAATTTC ATGATCCAAA GACCGGGCGA
TGGTATGACT GTAGAGATCG GGCTATCAGG TGGTCTGATG GCCGACTGGT CAGACTTGAG
ATTGCAACAG ACATCACCGA CCTGAAAAAG AGTGAGGAAG CTTATAAAAA AGCAGAAGAA
CGAATCAGGA TGGTTTTTGA TAACATCCCT GACGGGATAA TCGTTGCTGA TGTCAAGACG
AAGAGGTTCG TATTCGTAAA TGAAGCAATG AGCCGGATGC TTGGCACGAC CCGTGAAGAC
CTTATCGGAC ATACAACCGC AGAGATTCAT CCTGTCTATG CTCTCCCCTC TGTCATGTCA
GAGTTTGAAA AGATGCGATC AGGGGTTCTC CATTTTGTTT CGAACATCCC GGTTCAAAGA
AAGGACGGGA GTATATTTTT TGCAGATATC AACAGTTCAC TCCTGGAACT TGACGGCCAG
AAAACCCTCC TTGGGGTATT TCACGACTGT AGTGATCGTA TCAGGTCTGA TGAGGAGAAT
AAACTGCACA TGCTTCGTCT CCAGACATTC CTGACCCTGC TCAGGATGGT TGATGCCTCC
GAGATGGATA TCCTCAATTA TTCACTCAAA CAGAGCCTTT ACATCACGAA AAGCCTGTAT
GCATTCATCG GGACCCTCTC TGCTGATGAA TCGGAGATGA TCATCCATTC CTGGTCGGAG
GGAGCCATGG ATATGTGTCA GGTCAGGGAT AAACCCCTTC ATTTTCCCAT CGATAAAGCA
GGAATATGGG GAGAATGTAT CCGGAACCGG ACGTCATGTC TGATAAATGA TTACTCTCTT
CCTCATCATG CAAAGCATGG ATATCCCGAG GGTCATATTG ACATTACCCG GTTCCTAGGG
ATGCCGGTCT TTGATGGTGA CCGGATCGTC GCAATATTAG CGGTTGCCAA TAAAGAATCA
GATTACCGTG ATGATGATAT TGATGCCCTG CAGACTCTGG GCACGATGAC CTGGGAGATA
ATACGGAGAA AGCGTGCAGA AGAAGAAATT TCAAGGCAGA ATGAAGCACT CTCATCGGCA
TATGAGGAGA TCCGCTCATC TGAAGAAGAA CTTCGCCATA ACTATGAGGA ACTGGAGATA
AGTCGTCAGA AAATTCTTGA ACGGGAGAAA GAGCTCCGGT TAAAACTGGA GACAATTCTC
ACTCCGGAGC ATGACATCAG CGAAGAGGAA TTTGCCAATA TTATCGACAG TCATGAGCTC
CAGATACTCA TGGACGATTT TTACGCCCTG ACTCATATAG GGATCGCCAT CCTTGATTTG
AAAGGCAATA TCCTGGTCGC TACAGGCTGG CAGGACATCT GTACAAAATT TCACCGGGTG
CATGAGGAGA GTTGTAAAAA CTGTATTGAA AGTGATCTTT ATCTCACCCG GAATGTGAAA
GCGGGAGAAT ACCTTGTGTA CAAGTGCAAA AACAATATGT GGGATATGGT CACTCCCATT
ATTATCGGGA ACCGGCACAT GGGAAATCTC TTCCTGGGAC AGTTCTTCTT TGATGACGAG
GTGCCGGATC GGGACGTATT TTCTGCACAG GCTGAAAGAT TCGGATTTGA TAAAGATGAA
TACCTGGCAG CACTGGACCG GGTTCCCCGG TGGAGCAAAA GCACAGTTAC AACCATCATG
GACTTTTATA CCCGGTTCTC CTCTCTGATC TCCCGGTTAA GTTACAGCAA TATTACCCTT
GCCCGGTCTC TGCTTGATCA GAAACGGTTA CATGCTGATC TGGAGGACCG GGAGAGACGT
CTTTCAGCGA TTATTCAGAA TTCTCCCGCA GGATATTTCC GTATCGACCG GAATGGAAAT
TATCAGGAAG TAAACGATGC CTGGCTGATG ATGCATCGGT ACCATGATAG ATCAGAGGTT
ATTGGACATC ATTTCTCTAT AACCCAGGTA GATACCAGTC AGGAGGCAGC CCAGAAGAAT
TTTGAGAGGT TACTCTCAGG TGAGCCGATT CCTTCAGGTG AGTTTACCCG GCGGTGCAGG
GATGGTACTA CAGGGATTCA TTCCTTTTCT GCCATTCCGG TTATGGAAAA TGGTGAGATT
ACCGGGATTG AAGGGTTTCT CATTGACATA ACAAACCGGA AGATGATCGA GGATGATCTC
AAGAGAAGCG AACAGGAATA CTGGTGGCTT CTTGAAAGTA TGATCAATGC ATTTGTTATG
TTCGAATCGG TTTTTGACGA TGACGGGAGA TTTATAAGTT ACCGGTTCCT GTATATCAAT
CGAGCATATG AAAACATCAC TGGCGTCAGG TTCCATGATG TGTATGGGAA GACGGTTCAT
GAAGTCTGGC CTGACACCGA GGATGAATGG ATTCAGCGAT ATGGTGAGGT CGCCGTAACA
GGTATACCCA GTGAGTTTGA TCTCTTCCAT GCACCCACGA ATAAGGCCTA CCACTGTCAT
GTATACCGGC CATGGAATGA TACCCGCCGG TTTTGTGTAA TATTTGAAGA TATCACGAAG
CGGAAAGAGG CAGAAGAAAC ATTACAGGAG AGCCGGGATC TCCTTGATGC AACCCAGAAA
CTGACCCGGA TAGGTGGATG GGAATGGCAT GTCCAAAGAC AGACAATGAC CTGGACCACC
GAGACCTACC AGATACATGA TATAGACCCG GGCAGCATTA CGCCCGGATC GCCGGAGCAT
ATAACAAAAA GTATCAGCTG CTATGATCCT GAAGACCGCC CGGTTATCCA GGCTGCCTTT
GAACGGTGTG TCACAGAAGG AGTGCCCTAT GACCTGGTTT TTCCATTCAC AACGATGAAA
GGAAGAAGAA TCTGGATACG GACAACTGCT GAGCCGGTAC TGGCTGACGG GAAGGTGATC
AGGGTCATTG GTAATATCAT GGATATAACG GATCAGAAAC TGGCTGAGGC AGCCCTTCAT
GAGAGTCAGG AGAAATATCG TCTGATCGCA GAGAATACGG CCGATAATAT CTGGATAATT
GACATGGACC TGAAGATGCA GTATTCAAGC CCCTCGGTTT GGAAAATGAA AGGGTTTACG
GTAGAAGAGA CCCTGGCACA ATCCATAACT GATATGATGA CACCCGCTTC AGTAGAAAAG
GTACTCAAAC TTTTTCATGA TGAGATGGAG GCAGAACTGG CAGGAACTGC AGATCCCAAC
CGGACCATAT CTTTTGATAC TGAGGAGTAC TGCAAGGATG GATCAGTCAT CATAGTTGAA
AATTCGGCTA CTCTTCTCAG GGACGAACAA GGCAGACCCA CTGGAATTCT TGGCATTTCA
CGTGATATTA CCGAGAGAAA AAAGATGCAG GATGCTTTGG TGCAGTCAAA CAAGAAGCTC
CGCCTCCTGA CAAGTCTGAC CAGGCATGAT ATTTTAAACC TTATCAGTTC TGTAAATGAG
TTTTTAGATC TTGCAAACTC TGAAGATGAT CCAGAAAAGG CACGATATTA TCTTTCCCTG
TGCAAGGAAG CTGGAGAACG GATGGAGGAT ACTATCGGGT TTACCAGAGA GTATGAAAAC
TTTGGTATCG TCTCATCCGG CTGGGTGAAT GTATCGTCGC TTGTCAGATC TGCCCGGTCT
GAGATCCCTC TTACAGATGT CAGTATTGAA TCCCTGATAT CTCCCACTCT TGAGATATTT
GCAGATCCTA TCATTCGGAA AGTATTCTCC ACCCTGATTG AAAATGCAAT CCGTCATGGA
AAGACCCTCT CATATATCCG GTTTGCAGAA GAGATCAGGG AAGGGGCCTG TATCATCATC
TGTGAGGATG ACGGGATTGG CATATCTGGT TCTGATAAGG AACATATTTT TGATCATGGG
TTTGGCAAAC ATACCGGAAT CGGCCTCTTC CTCTCCCGTG AGATATTATC GATCACCGAT
CTTTCTATCT GTGAATGCGG AGAAGAAGGA AAAGGAGCAA GATTTGAGAT AACGGTGCCG
GCAGGGAAAT TCAGAATAAA TGGGAAGACT GGATTATGA
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| Protein sequence | MPKSHRSPIH MTTILYIDDE PLVADASVRF LTHSGFEVDK ALSGREALEK LRAGRYDAVI
SDYHMPGMTG IELLKIIRSD IGDIPFILFT GKGREEVVIE AIEHGVDYYV QKGGTPGPLF
ADLTHKINIA IQRRESERLL RINEKRLRKA QEIGKIGCWE HAVGSDVLWM SEEALRLYGM
DGPSRNVLIS DIFACIREQD KVEKAFRNLI ETRADFHIEY SIIPVNNTAP RILLSIASVE
EDDPGTGRRI VGITQDITEK KNSEWRLTKK NADLTAALDR LTNAEEKLTH QLEEIRAAHE
KISESEEKYR KLFEENIVGT AVHEIICNES GAPVDYRFLD VNPAFEQITG LVGDEIRNKT
VLEVLPDTEP YWIDIYGRVA LTGKPAHFEQ FSRELQKYFE VFAYAPQIGQ FVTLFQDITE
RRRRENSLNE LNAYLENLFV YSNVPIIVWD PEGIISRINH SFEILIGRPR DEVIGKPLDI
LFPERDAEYA MRLIQTTRDG VRWETVEIPI LHADGTIRVV IWNSATIYAA DGKSPIATIA
QGRDITGEKL LEKEKQQAMN KIQENIAKLA ILNDGIRNPL TIISTYADMA DDDDIAKNIH
AEVMRIDAMV NTLDKEWVSS EKILNYLRKQ DKITPDFKPV LSEAQPDFDT RLSTPSGQEH
ILPVVSSQNL FIEEIQAQLY AILDSIDAFV YVADMETYDI LYMNERGRAL FGNVHGQKCY
SHIRAHSEGP CPYCTNHLLL SNQKPTGVCR WEFHDPKTGR WYDCRDRAIR WSDGRLVRLE
IATDITDLKK SEEAYKKAEE RIRMVFDNIP DGIIVADVKT KRFVFVNEAM SRMLGTTRED
LIGHTTAEIH PVYALPSVMS EFEKMRSGVL HFVSNIPVQR KDGSIFFADI NSSLLELDGQ
KTLLGVFHDC SDRIRSDEEN KLHMLRLQTF LTLLRMVDAS EMDILNYSLK QSLYITKSLY
AFIGTLSADE SEMIIHSWSE GAMDMCQVRD KPLHFPIDKA GIWGECIRNR TSCLINDYSL
PHHAKHGYPE GHIDITRFLG MPVFDGDRIV AILAVANKES DYRDDDIDAL QTLGTMTWEI
IRRKRAEEEI SRQNEALSSA YEEIRSSEEE LRHNYEELEI SRQKILEREK ELRLKLETIL
TPEHDISEEE FANIIDSHEL QILMDDFYAL THIGIAILDL KGNILVATGW QDICTKFHRV
HEESCKNCIE SDLYLTRNVK AGEYLVYKCK NNMWDMVTPI IIGNRHMGNL FLGQFFFDDE
VPDRDVFSAQ AERFGFDKDE YLAALDRVPR WSKSTVTTIM DFYTRFSSLI SRLSYSNITL
ARSLLDQKRL HADLEDRERR LSAIIQNSPA GYFRIDRNGN YQEVNDAWLM MHRYHDRSEV
IGHHFSITQV DTSQEAAQKN FERLLSGEPI PSGEFTRRCR DGTTGIHSFS AIPVMENGEI
TGIEGFLIDI TNRKMIEDDL KRSEQEYWWL LESMINAFVM FESVFDDDGR FISYRFLYIN
RAYENITGVR FHDVYGKTVH EVWPDTEDEW IQRYGEVAVT GIPSEFDLFH APTNKAYHCH
VYRPWNDTRR FCVIFEDITK RKEAEETLQE SRDLLDATQK LTRIGGWEWH VQRQTMTWTT
ETYQIHDIDP GSITPGSPEH ITKSISCYDP EDRPVIQAAF ERCVTEGVPY DLVFPFTTMK
GRRIWIRTTA EPVLADGKVI RVIGNIMDIT DQKLAEAALH ESQEKYRLIA ENTADNIWII
DMDLKMQYSS PSVWKMKGFT VEETLAQSIT DMMTPASVEK VLKLFHDEME AELAGTADPN
RTISFDTEEY CKDGSVIIVE NSATLLRDEQ GRPTGILGIS RDITERKKMQ DALVQSNKKL
RLLTSLTRHD ILNLISSVNE FLDLANSEDD PEKARYYLSL CKEAGERMED TIGFTREYEN
FGIVSSGWVN VSSLVRSARS EIPLTDVSIE SLISPTLEIF ADPIIRKVFS TLIENAIRHG
KTLSYIRFAE EIREGACIII CEDDGIGISG SDKEHIFDHG FGKHTGIGLF LSREILSITD
LSICECGEEG KGARFEITVP AGKFRINGKT GL
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