Gene Mhun_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1399 
Symbol 
ID3923753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1597344 
End bp1598225 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content44% 
IMG OID637897034 
Productputative transposase 
Protein accessionYP_502856 
Protein GI88602678 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.213871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACT CAGATCATCA ATACAAGCGA ATATTCAGTC ATCCCCGGAT GGTTGCAGAT 
CTTATACGGG GTTTTTTGGA TCCTGACCTT GCTGATGGCT GTGACTTTTC GACTCTGAAA
CGGTGTAATG GGAGTTATAT CACTGATGAT CTCAGGGAGC GTGAAGACGA TATCATCTGG
AAGGTAACAT ACGGGGAAAG AACCCTCATT CTTTACATCC TCATCGAATT CCAGTCCAAA
CCAGATTATG CCATGCCAGT TCGGATTATG ACATATATGG GTCTTCTCTG GCAGGATCTT
ATACGGACAA AGGTCATAAA CCCGATTAAA CCGTTACCGG CAATTATGCC AATAGTCCTT
TACAATGGAA AACAACCCTG GAGTGTGCCG GAAGATATCA AAAAGACTAT TAACGCGCCT
GAACCACTTC ACACATTTGT CCCGTCAGTT CCATACCTGC TGATTGATGA ACTCAGACTA
TCTGTGCATC ACCTGGTTGA GGTCAGAAAT TTATCAGCAT GTTTGTTCAG ACTTGAACAG
TCGGCAGGGC CGTTGGAACT TATAGAACTT GGATTCAGAT TAAACCAGTG GATGGAAAAA
GATCCTGGAC TTGCTGAGAT GAGAAGGGAT TTCTCGTTAT TCTTTGAGAA TACCTTAATG
AGAGATCAGG ATATACCTAT ACCTAACCCG TTTGTTGGAG GGACCATGTT AGCTGAAAAA
GTAGACAAGT GGATTGCAGC ATATAAGGCG GAAGGGAAAG CTGAAGGCAG AATTGAAGGA
ATGGCAATTA TTCTGGAGCG GATGAAAAAA GCAGGGATGT CAGTTGCCGA GATCGCAAAG
ATAACAGGGA TGCCAGAGGA AGAGATCAGA TCTCTGATAT GA
 
Protein sequence
MKDSDHQYKR IFSHPRMVAD LIRGFLDPDL ADGCDFSTLK RCNGSYITDD LREREDDIIW 
KVTYGERTLI LYILIEFQSK PDYAMPVRIM TYMGLLWQDL IRTKVINPIK PLPAIMPIVL
YNGKQPWSVP EDIKKTINAP EPLHTFVPSV PYLLIDELRL SVHHLVEVRN LSACLFRLEQ
SAGPLELIEL GFRLNQWMEK DPGLAEMRRD FSLFFENTLM RDQDIPIPNP FVGGTMLAEK
VDKWIAAYKA EGKAEGRIEG MAIILERMKK AGMSVAEIAK ITGMPEEEIR SLI