Gene Mhun_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1398 
Symbol 
ID3923752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1596267 
End bp1597136 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content43% 
IMG OID637897033 
Productputative transposase 
Protein accessionYP_502855 
Protein GI88602677 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.206405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACT CAGATCATCA ATACAAGCGA ATATTCAGTC ATCCCCGGAT GGTTGCAGAT 
CTTATACGGG GTTTTTTGGA TCCTGCCCTT GCTGATGGCT GTGACTTTTC GACTCTGAAA
CGGTGTAATG GGAGTTATAT CACTGATGAT CTCAGGGAGC GTGAAGACGA TATCATCTGG
AAGGTAACAT ACGGGGAAAG AACCCTCATT CTTTACATCC TCATCGAATT CCAGTCCAAA
CCAGATTATG CCATGCCAGT TCGGATTATG ACATATATGG GTCTTCTCTG GCAGGATCTT
ATACGGACAA AGGTCATAAA CCCGATTAAA CCGTTACCGG CAATTATGCC AATAGTCCTT
TACAATGGAA AACAACCCTG GAGTGTGCCG GAAGATATCA AAAAGACTAT TAACGCTCCT
GAACCACTTC ACACATTTGT CCCGTCAGTT CCATACCTGC TGATTGATGA ACTCAGACTA
TCTGTGCATC ACCTGGTTGA AGTCAGAAAT TTATCAGCAT GTTTGTTCAG ACTTGAACAG
TCGGCAGGGC CGGTGGAACT TATAGAACTT GGATTCAGAT TAAACCAGTG GATGGAAAAA
GATCCTGGAC TTGCTGAGAT GAGAAGGGAT TTCTCGTTAT TCTTTGAGAA TACCTTAATG
AGAGATCAGG ATATACCTAT ACCTAACCCG TTTGTTGGAG GGACCATGTT AGCTGAAAAA
GTAGACAAGT GGATTGCAGC ATATAAGGCT GAAGGCAGAA TTGAAGGAAT GGCAATTATT
CTGGAGCGGA TGAAAAAAGC AGGGATGTCA GTTGCCGAGA TCGCAAAGAT AACAGGGATG
CCAGAGGAAG AGATCAGATC TCTGATATGA
 
Protein sequence
MKDSDHQYKR IFSHPRMVAD LIRGFLDPAL ADGCDFSTLK RCNGSYITDD LREREDDIIW 
KVTYGERTLI LYILIEFQSK PDYAMPVRIM TYMGLLWQDL IRTKVINPIK PLPAIMPIVL
YNGKQPWSVP EDIKKTINAP EPLHTFVPSV PYLLIDELRL SVHHLVEVRN LSACLFRLEQ
SAGPVELIEL GFRLNQWMEK DPGLAEMRRD FSLFFENTLM RDQDIPIPNP FVGGTMLAEK
VDKWIAAYKA EGRIEGMAII LERMKKAGMS VAEIAKITGM PEEEIRSLI