| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1396 |
|---|
| Symbol | |
|---|
| ID | 3923750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1592643 |
|---|
| End bp | 1595885 |
|---|
| Gene Length | 3243 bp |
|---|
| Protein Length | 1080 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637897031 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_502853 |
|---|
| Protein GI | 88602675 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4983] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.146503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCC AGATACAAAA TACCCTACAC ACCCTCTTTC AGCCAGGATC AGTCCTTGAA
CTTCGAGCCC TTTGGAAGAA TGGCGGTGTT GCATCAGGAT ACTACACCGA TTATGAGAAG
ATGGCCCAGG ATGCGGCAAT TCTTGACGGG TTATCAGATA TAGCAGGAAT CTATGTTGTA
GCAAATGAGA TCAATCCGGA CCTCTTCGCA CGGCGGGCAA ACCGTCTGAA TATGAAGTTG
TCTAGGGACG ATAAGACCAC TGGTGACGAA GATATCATTC ATCGGAACTG GTTCCTAATT
GACGTAGATC CCCGGCGACC TTCCGGGATA TCATCAACCG ATGCAGAGCA CCAGGCTGCC
CTTCACAAAG CCAACCGGAT CAGGGAATTC CTCTCTGAAC TTGGATGGCC TGAACCAGTC
TGTGCCGACT CCGGGAACGG GGCACATCTC ATGTACCGGA TAGACCTTCC CAATGATGAT
GCCTCACAAC GCCTCATAAA ATCCGCCCTT TTAGTCCTCT CAGCATTCTT CTCCGATGAA
CAGTCAGATG TAGACACCAC CGTCTCCAAT GCAGCACGGA TATGGAAATT ATATGGAACA
CTCTCACGAA AGGGTGATTC AACCGATTAC CGGCCACATC GTCGTTCCCT GATTCGATCT
CGTCCGGATG TATTAGAAAT TACCACGTAT GATCTGTTCC TCCGCCTGGT ATCGCTTCTC
CCCATGGGTG AGGATATCAG GACAGGAATA GAAAAACAAG GCATCATCCC CCGGGAAGAG
GGATTCTCTC TTGGAACATG GTTGCAGAAG AATGGATTCT CATGCAGGGA AAAGCCCTAT
GGAGGAGGCA TTCTCTACCT CTTTGATCAG TGTCCGTTCT CATCCGCCCA TGCTGACGGA
GCATATGCAA TTCAGTTCGC CAATGGCGGC ATATTCGCCG GATGTCACCA CAATTCCTGT
GGCGGCGGAA CCCAGCGATG GCAGGAACTT CGTGAACGAA TAGAAGGAAA ACGTCCTCAC
CGTGATTATG ACACCTGGCG ACGGGAAGGA ATCAGAAAAC GGGCACGGGA TAAAGCAGAA
CGTGACGGTA TACCTGAATT ACCGGGTGCA GAGGAATGGA AACCAGCCGA TGAAGATACC
AATATTACCC CGTCCGAATC TGCCATAAGC CCGGATAAAC CCAGTCAGAC CAGTCATCCC
AGACATGAAG TTTCAATACC CCTGGAGAAC CGTCCGGAGA TCTGGGAGAA AGCCATGGAG
ATTCTACATC ACGGAAACCC AATTCAATAC CTCCTTGACA CCTTCGCAGA ACATCATGTC
GGTGACGGGA TTGTTGCCCG ATGCCTGATC ATGTCACTTG CATCCCGGCT GGTTGAAAAT
TCAAAGGGGC TTCATGTGCT GGTCACCGGA GAATCAGGAA AGGGAAAGTC CCACAGTTTT
GATACGATGC TGGACCTTAT CCCAGAAGAA GACACCCTTG CCGGCCGGTT CAGTGACAAG
GCCCTCTTCT ATCTTGATGA CCTGAAAAAG GGATCAGTCA TCTGTCTTGA TGATGTATCA
CTCTCCGAAC CAATGCAGGA GACCTTAAAG GGAGTCACCA GTAGTTTTCA CAAACCCTTC
ATCTACCGGA CGGTTGACAA GGAACGGAAA GGTCTGGTCA GGATTATTCC GGAACGGTGT
ATCTGGTGGG TTGCAAAGAT GGAAGGAACG GGTGACGACC AGGTATGGAA TCGTATGCTC
ACCGTCTGGA TAGATGACAG CATCGAGCAG GACACAGAGG TCATGGCACG GGAACTTGCA
GCAGCTGCAC GATCCACGGC CCTGCATCCA GAGATATCAG AGCGGACATT CATCTGCCGG
GCACTCTGGA AGGAGCTCAG GGAATACCCG GTCCTCATAC CCTATGCAGA ACGAATCAGG
TTCGCATCGG TCCGGAACCG GAGAAACCTG ACGATGCTTT TGGATCTCAT CCGGTCAGTC
GCACTCATGT ACCAGTATCA GCGTGTGATT CAGGAGACAA ACGGAGTTAA GGAAGTTATT
GCATCAGAGG AAGATTTCGC CCTGGCAAAG GAGATATTCC TACTCATATC CGGCACTCAT
GGCGGCCAGT ATACCAAACT GACCAAGGCA GAGTATGAGA TGGTTGAGAT CATCAGAAGA
GAGCATATCG TCTCATTCAC CCTGCAGGAG ATGCAGAAAT TACTTGGAAA GTCACGAACC
GCCACGTACC GGATTATTCA TCCCAAAGAT CCGAATAAAC GTGAGTATGA AGGGTTGCTT
GAGAAATGCC CGCCCCTCTC CTTTACCAAG CAGTCTCTTC TGCTTGAGAG TGGAAAGCGT
CAGATCTGTA ATGTCTACAC CTGGGATTAT GAGATGGATG CCGTATGGTC AGGACGTGAG
GGGTGTTGGC TGTCATCCGA TGACGACGAT GATCAGTCTG ATGAGATGAA CCGATCACCT
GTGCAGGTGT GCCCCCCTGT GCCCGTGGTG TTTTCAGAAA ATGACACAGC AATCAAACCC
CGTGATGCAG AATTAAATCA AAACACAGAA CAATCCGGGT CAGAAAAAGA TGGTGTGCGT
ACCCCGGCAG GATCACAGAG CCCGGATGTC AGTGATCATA CCGGTTCCTG TGAATTCAAA
AATAATGCAC ACCGTACACA GAGTTTAGGG AATACGAATA ATTCTTCACC TGATTCTGAA
ACGGTACCTG ATGTACCTGT GCAAAAAAAT GAGAACAGAG TGGGATCAGG GTGTGCACAG
GATCACAGCG TGCAAGAATC AGATACAGAT ACGGATACAG ATACAGTCAC AAAGACACGT
GATCGATTTC TATCAAAATC AGAGATTGAT CCAGCCCGGT GTATCAGGAT AGAAGGAACA
GGAGCACATA CCAGAGTCTG TGATAGTTGT GGAGCGACTG GAGGCATATA CGAACTCAGG
GCAGGGATTC GAATGCCAGT TACCAATGCT GTTCCGATCA TTTGTGAAAA GTGCCATAGT
GCAGCGGTTG CACGGGAGGT ATTATCATTC CGGGCTCTCC CAGGACTCCT GCCAATTGCC
AACATGAAAC CGTTTGATAA AGAGGGGGTG CCATGTTCGC TCTGTCATAT CAACCGGATT
GCATGGCTGG ATGACGAGAC AAATATAGGC CTGTGCCAGA CGTGTTATGA GCGGGAAAAG
GATCTTTCCG CCAGAGAGCG TGATACACGG GGGACTATTG AGGAGAGATC CGATGCCATT
TGA
|
|---|
| Protein sequence | MTSQIQNTLH TLFQPGSVLE LRALWKNGGV ASGYYTDYEK MAQDAAILDG LSDIAGIYVV
ANEINPDLFA RRANRLNMKL SRDDKTTGDE DIIHRNWFLI DVDPRRPSGI SSTDAEHQAA
LHKANRIREF LSELGWPEPV CADSGNGAHL MYRIDLPNDD ASQRLIKSAL LVLSAFFSDE
QSDVDTTVSN AARIWKLYGT LSRKGDSTDY RPHRRSLIRS RPDVLEITTY DLFLRLVSLL
PMGEDIRTGI EKQGIIPREE GFSLGTWLQK NGFSCREKPY GGGILYLFDQ CPFSSAHADG
AYAIQFANGG IFAGCHHNSC GGGTQRWQEL RERIEGKRPH RDYDTWRREG IRKRARDKAE
RDGIPELPGA EEWKPADEDT NITPSESAIS PDKPSQTSHP RHEVSIPLEN RPEIWEKAME
ILHHGNPIQY LLDTFAEHHV GDGIVARCLI MSLASRLVEN SKGLHVLVTG ESGKGKSHSF
DTMLDLIPEE DTLAGRFSDK ALFYLDDLKK GSVICLDDVS LSEPMQETLK GVTSSFHKPF
IYRTVDKERK GLVRIIPERC IWWVAKMEGT GDDQVWNRML TVWIDDSIEQ DTEVMARELA
AAARSTALHP EISERTFICR ALWKELREYP VLIPYAERIR FASVRNRRNL TMLLDLIRSV
ALMYQYQRVI QETNGVKEVI ASEEDFALAK EIFLLISGTH GGQYTKLTKA EYEMVEIIRR
EHIVSFTLQE MQKLLGKSRT ATYRIIHPKD PNKREYEGLL EKCPPLSFTK QSLLLESGKR
QICNVYTWDY EMDAVWSGRE GCWLSSDDDD DQSDEMNRSP VQVCPPVPVV FSENDTAIKP
RDAELNQNTE QSGSEKDGVR TPAGSQSPDV SDHTGSCEFK NNAHRTQSLG NTNNSSPDSE
TVPDVPVQKN ENRVGSGCAQ DHSVQESDTD TDTDTVTKTR DRFLSKSEID PARCIRIEGT
GAHTRVCDSC GATGGIYELR AGIRMPVTNA VPIICEKCHS AAVAREVLSF RALPGLLPIA
NMKPFDKEGV PCSLCHINRI AWLDDETNIG LCQTCYEREK DLSARERDTR GTIEERSDAI
|
|---|
| |