Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1380 |
Symbol | |
ID | 3923890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 1577739 |
End bp | 1579337 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637897017 |
Product | hypothetical protein |
Protein accession | YP_502839 |
Protein GI | 88602661 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0528526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.233123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCATC TATTACATGA TGCCTGGATT CCGGTTGTGA GAAAAAACGG TGATTCCGGT CTTATCGCTC CGCATCAGAT TACCTCGGAT TATGATACAA ATCCGGTGAT AGAACTTAAT GCTTCACGTC CAGATTTTAA TGGAGCTCTT ATTCAGTTTC TGATAGGATT AATTCAGACT GTCTGTCCTC CTGAATCGGA TAAAGAATGG ACTGACCGGT TAGATAATGT AATTCCTTCA GATGTATTGA AGGGACACTT CAAGCAGATT CAGGATGCCT TCTCTCTGGA TGGTAAAGGC CCCAGATTTA TGCAAGATAT CAGTATTGGT GATGAGAAGA AAAATTCAGT TGACGGTCTT CTTATTGAAA TGCCTGGGGA GAATACGGTC AAGAAAAATA CTGATTTTTT TGTTAAACGC GATACTGTAA AGCAGATGTG TCCCTCTTGT GCTGCTATGG CTTTATTTAC TCTTCAGGTT AATGGACCAG GTGGTGGAGC TGGGCATAAA ACAGGTTTAC GAGGTGGGGG GCCATTAACG TCTGTAATCT TGGGGGAGAC ATTGTGGGAG ACGGTATGGC TGAATATTAT TCCTTCAATA AAATTTTTTG GAGATGCGAT AGCAAAACAA AAAAAGAGTA TGGATATGAT CTTTCCCTGG TTTGGGAAGA TTCGCCTGAG TGATAAAAAG GAAAAAACTG GCGTGATCGA TGTTAATCCT TTACAGATGT TCTGGGGGAT GGGAAGACGG ATATTACTTG ATTTTGAGGA CAAGCCGGTA GGGGCCTGTG ATGTATGTGG TCTTGCATCT TCAGCAACCG TGTTGACATA TCATACGAAA CCTCATGGAG TTGATTATGA CGAAACCTGG GACAATCACA CACTTACTCC TTATTACCTG GATAAAGAAG TTTATCGCCC AATTCATCTT CAACCCGGGG GTATTACGTA TCGAAATTTT ATGGGTCTGA TTATTCCGGA TTCGTCAAGG AATATCAAGG TTTCCAGAAC TGTAACAAAT TTTCAGAATA ATATTATTCG TTTAAAGCGG AAATCATTTA AAAAGGTTAG GTTATGGTCA TTTGGATATG ATATGGATAA TGCAAAAGCC AGATGCTGGT ATGAAAGCCG GATGCCAATC TACCTGCTGG ATGATGAGAA AAAGAGAGAA TTATTTGAAA ATATTGTTTC AAATCTTATA TTTACAGCAG AATATGTGTT GCAGTCTCTT GCCGGCTCAA TAAAGGACGC AATTTCAGGA CATGGTAATA AAGGAAAAGA ACCTGTTGAT TTAAGATCCC GATTTTGGAA TGAGACTGAG GAATTGTTCT ATGCTACACT TGATAGACTT TTTTTCTCTT TGGGAAATGT GGAGCAGATA GATCAAATAA AGCGTGAATG GTATCGTATG TTAGTTGGTC ATTCTGTTTT GTTATTTGAT TATTATACCC AGGTTTCACT CATCAGCGAT CTGAATGATC CTAAGAGTGT TATCGATGCC CGAATCAAAT TTAAAAAATT TACCGGAGAG AACACGAAAA AAGTTATTTC ATTACTGGGT CTTCTCATGA AGGACTCAAT GGAGGAGAAA AAGCTATGA
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Protein sequence | MIHLLHDAWI PVVRKNGDSG LIAPHQITSD YDTNPVIELN ASRPDFNGAL IQFLIGLIQT VCPPESDKEW TDRLDNVIPS DVLKGHFKQI QDAFSLDGKG PRFMQDISIG DEKKNSVDGL LIEMPGENTV KKNTDFFVKR DTVKQMCPSC AAMALFTLQV NGPGGGAGHK TGLRGGGPLT SVILGETLWE TVWLNIIPSI KFFGDAIAKQ KKSMDMIFPW FGKIRLSDKK EKTGVIDVNP LQMFWGMGRR ILLDFEDKPV GACDVCGLAS SATVLTYHTK PHGVDYDETW DNHTLTPYYL DKEVYRPIHL QPGGITYRNF MGLIIPDSSR NIKVSRTVTN FQNNIIRLKR KSFKKVRLWS FGYDMDNAKA RCWYESRMPI YLLDDEKKRE LFENIVSNLI FTAEYVLQSL AGSIKDAISG HGNKGKEPVD LRSRFWNETE ELFYATLDRL FFSLGNVEQI DQIKREWYRM LVGHSVLLFD YYTQVSLISD LNDPKSVIDA RIKFKKFTGE NTKKVISLLG LLMKDSMEEK KL
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