Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1357 |
Symbol | |
ID | 3923182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 1560131 |
End bp | 1561711 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637896994 |
Product | UvrD/REP helicase |
Protein accession | YP_502816 |
Protein GI | 88602638 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.981315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACACA CCCAGCTTCT TCATACTATC CTTCATGAAC CACGACCGCT ATCAGAGAGC CAGCAATCAG CAATAACGAC ACAATCACCG CATGTCCGGA TTATTGCCGG TGCAGGGGCC GGGAAGACCG AAACACTGAC GAGAAAGATT GTTTCTCTGC TATTGGTTGA GCATGTGGAG CCTGCCTCTA TTGTTGCGTT TACGTTCACC GAGAAAGCCG CAGCGAATAT GAAGAGCAGA ATATATAAGC GTGTCAAGGA GCTGGGGGAG GATGCGTTAT GTGCCCGGCT TGGTGAGATG TATGTCGGGA CCATTCACGG ATTCTGCTTT CACCTTCTTG AGGATCAGTT CGGGTATGGG TCCTGGGGAG TTCTGGATGA GAATCAGGAG ATGGCCTACC TGATGAGGGT CGGCTGGGAA CTGAATCTGA CAGGCAGTTC CAATTATACC GAAAAATGTC AGGATTTCAA GAGGAGTGTG GGCGTTTTCT ATAATGAGAT GCTCTCACGG GATGAGGTGA AGAAGCGTTC TCCAGATTTT TATTATTCCC TTACCAAATA TGAAGCGTGT CTTGATGAAC ACCACCGGCT GACCTTTGAC CGGATGATTG CTCTGACGGT GGAGAATCTC CGGAAGCGTC CTGAAGTCGG GGATTTTATT CAGTATCTTA TAGTGGATGA GTACCAGGAT ATTAACCGGG CACAACAGGA GCTGATTGAG ATTCTTGGCC GGGGGAGTAA AATTTTCGTC GTTGGGGATC CACGGCAGAC GATTTACCAG TGGCGGGGAT CTGATGAGCA CTGTTTTGAG GAGTTTGCTG AGTATTACCA GCAGTCTGAG ACGATATCCA TCCCGGAGAA CCGCCGGAGT GTGCAGACGA TTGTGCAGGC GGCGAATTAT TTTTCTGAGA CGTTTGAGAA GTGCCGGTAT TCTCCGATGG TGTATTCCCG GTCCGAACAG GGAAAGGCTC ATCTTGTGGA GTTTTCAGAC AAACGGAGTG AGGCCGTCTT TATTGCTGAT GAGATCTCAC GGCTGGTTGA GAGTGGCAGG TGCAGGTACG GTGATATAGG GATTCTTCTC AGGAGTGTGA ATACGAGTGG TGAGCCGTTC ATTGACGTGT TCCGGGAGAA GCATATTCCC TTCATGGTCG GGGGAAAGGT GGGCCTATTC CGTAGAGCGG AGATTGCGGC TCTAGCAAAG ATTGTGGTCT GGGCTTCTCC GAACGGGTTT TTCCAGAAGT CACGATGGGA CTGGAAGAAT AAGATTGAGG GGGAGGACCT GCTCACGTTC GGGTCACAGG AATGGGCGGA TGCAATTCCG GGTCTTTGTA CGGTTGATGA GATTCTTCCC CGGCTGAATG AGTGGAAACG GCAGCTTCAT GGGAAAGGGT TTGATCATGT TGCCGGTATG TACCAGGAAC TCCTCTCCAT TCTCGGGTTT TTACAGCTGG ATCCGGATAA CCCGGAACAT GCGGTCATCA TGGCAAATCT GGGCAGGTTC GGGGATATCT TAAGCGATGT GGAAACTGCA CAGAAACTCG GGGGTCACCG GATCTCATGG CCGACTCTGT TAAGACGGTA A
|
Protein sequence | MTHTQLLHTI LHEPRPLSES QQSAITTQSP HVRIIAGAGA GKTETLTRKI VSLLLVEHVE PASIVAFTFT EKAAANMKSR IYKRVKELGE DALCARLGEM YVGTIHGFCF HLLEDQFGYG SWGVLDENQE MAYLMRVGWE LNLTGSSNYT EKCQDFKRSV GVFYNEMLSR DEVKKRSPDF YYSLTKYEAC LDEHHRLTFD RMIALTVENL RKRPEVGDFI QYLIVDEYQD INRAQQELIE ILGRGSKIFV VGDPRQTIYQ WRGSDEHCFE EFAEYYQQSE TISIPENRRS VQTIVQAANY FSETFEKCRY SPMVYSRSEQ GKAHLVEFSD KRSEAVFIAD EISRLVESGR CRYGDIGILL RSVNTSGEPF IDVFREKHIP FMVGGKVGLF RRAEIAALAK IVVWASPNGF FQKSRWDWKN KIEGEDLLTF GSQEWADAIP GLCTVDEILP RLNEWKRQLH GKGFDHVAGM YQELLSILGF LQLDPDNPEH AVIMANLGRF GDILSDVETA QKLGGHRISW PTLLRR
|
| |