Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1316 |
Symbol | |
ID | 3922860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 1501211 |
End bp | 1502383 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637896953 |
Product | periplasmic binding protein |
Protein accession | YP_502775 |
Protein GI | 88602597 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.867732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0135564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGGT TATTACCTAA ACCATTCATT AAAGATTCAC TGGAATACAA GAGTAAAAAA TCAAATGGCT TTTTTATAAT TACTTATTTC CTTATGATTA TTGCCATCGC ATCCTCTCCG GTGAGTTCTG CAGACATAGA AAAAACAGCG GGAGATTCCA GTATCACTAT TATCGACGAC TGGGGTAGAG AAGTGACCCT TGATAAACAT GCTGAACGAA TCGCATTCAG CCATACAGCA GCCGGTGAAG GAATTCTCCT GGCGGGTGGA TGGGATAAAG TTGTCGGTAG AGATGGCTCT CTTACAGATT CCAGGTTTTA TTCAAATCTA GACACTATTC CTGCTGTGAG CACTCCTAAT CAGGCATTTT CTCTTGATTT TGAAAAAATT ACGGAACTTC ATCCTGATCT TTTCATCATC CAGAAACACT ATGATTCAAG GGAGCAGTTT GATGAAATTG CCAATAAACT TGAACCTGAT ACCCCGATAG TCGGCCTGGA TTTTCTTGAA CCTGAAAATG CTGACAGTAT CAAAAAACTG AGCATTTTAA TCGGAACAGA GCAAGTCGCT GATGATTATG TTAATTTTCA TGATGAGATC ATTAAAAACC TGAAAGAAAA AACAGATACA TTATCACCAG ACGAAAAGCC AAATGTTTTT TTAAAAGGTG GAACTACTGA TAAAATTAGC ACATTTGGAA GAGATGCTTC ATTCTGGAAT AGAATGTGTT CTCTTGCAGG TGGAAAAAAT ATCGCTGACG GTCTTCCCGG TGATAATCAA GAGGTAGATC TTGAGTGGCT TACCCAGCAG GACATTGACA CTATTGTTGG CTCATGCAGT TATAGAAATT ACCCGGAATC TTTTGGTTAT CTGGCAACCG AACCATTCCA TGCATCTGAA AAAGCTGACG AGATAATCAT TGATATTAAG AATAACGAGA TTTTTTCACA TTCAGATGCA GTTTTAGATG ATAATGTCTT CTTACTGGAA GGAACGATGA TAAGCAATCC AAAAGCATTC ATTGGATCTG CTTATCTGGC AAAATGGCTC CATCCAGACC TCTTCAGCGA TCTCGATCCA GAACAAATCC ACCAGGAATA TTTGAGCAGA TTCATTGGAA CTGATTATGA TCTTAAGAAT ATTGGATTAT TCGGATACCC GGCTAATTCA TAA
|
Protein sequence | MKRLLPKPFI KDSLEYKSKK SNGFFIITYF LMIIAIASSP VSSADIEKTA GDSSITIIDD WGREVTLDKH AERIAFSHTA AGEGILLAGG WDKVVGRDGS LTDSRFYSNL DTIPAVSTPN QAFSLDFEKI TELHPDLFII QKHYDSREQF DEIANKLEPD TPIVGLDFLE PENADSIKKL SILIGTEQVA DDYVNFHDEI IKNLKEKTDT LSPDEKPNVF LKGGTTDKIS TFGRDASFWN RMCSLAGGKN IADGLPGDNQ EVDLEWLTQQ DIDTIVGSCS YRNYPESFGY LATEPFHASE KADEIIIDIK NNEIFSHSDA VLDDNVFLLE GTMISNPKAF IGSAYLAKWL HPDLFSDLDP EQIHQEYLSR FIGTDYDLKN IGLFGYPANS
|
| |