Gene Mhun_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1316 
Symbol 
ID3922860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1501211 
End bp1502383 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content39% 
IMG OID637896953 
Productperiplasmic binding protein 
Protein accessionYP_502775 
Protein GI88602597 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.867732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0135564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGT TATTACCTAA ACCATTCATT AAAGATTCAC TGGAATACAA GAGTAAAAAA 
TCAAATGGCT TTTTTATAAT TACTTATTTC CTTATGATTA TTGCCATCGC ATCCTCTCCG
GTGAGTTCTG CAGACATAGA AAAAACAGCG GGAGATTCCA GTATCACTAT TATCGACGAC
TGGGGTAGAG AAGTGACCCT TGATAAACAT GCTGAACGAA TCGCATTCAG CCATACAGCA
GCCGGTGAAG GAATTCTCCT GGCGGGTGGA TGGGATAAAG TTGTCGGTAG AGATGGCTCT
CTTACAGATT CCAGGTTTTA TTCAAATCTA GACACTATTC CTGCTGTGAG CACTCCTAAT
CAGGCATTTT CTCTTGATTT TGAAAAAATT ACGGAACTTC ATCCTGATCT TTTCATCATC
CAGAAACACT ATGATTCAAG GGAGCAGTTT GATGAAATTG CCAATAAACT TGAACCTGAT
ACCCCGATAG TCGGCCTGGA TTTTCTTGAA CCTGAAAATG CTGACAGTAT CAAAAAACTG
AGCATTTTAA TCGGAACAGA GCAAGTCGCT GATGATTATG TTAATTTTCA TGATGAGATC
ATTAAAAACC TGAAAGAAAA AACAGATACA TTATCACCAG ACGAAAAGCC AAATGTTTTT
TTAAAAGGTG GAACTACTGA TAAAATTAGC ACATTTGGAA GAGATGCTTC ATTCTGGAAT
AGAATGTGTT CTCTTGCAGG TGGAAAAAAT ATCGCTGACG GTCTTCCCGG TGATAATCAA
GAGGTAGATC TTGAGTGGCT TACCCAGCAG GACATTGACA CTATTGTTGG CTCATGCAGT
TATAGAAATT ACCCGGAATC TTTTGGTTAT CTGGCAACCG AACCATTCCA TGCATCTGAA
AAAGCTGACG AGATAATCAT TGATATTAAG AATAACGAGA TTTTTTCACA TTCAGATGCA
GTTTTAGATG ATAATGTCTT CTTACTGGAA GGAACGATGA TAAGCAATCC AAAAGCATTC
ATTGGATCTG CTTATCTGGC AAAATGGCTC CATCCAGACC TCTTCAGCGA TCTCGATCCA
GAACAAATCC ACCAGGAATA TTTGAGCAGA TTCATTGGAA CTGATTATGA TCTTAAGAAT
ATTGGATTAT TCGGATACCC GGCTAATTCA TAA
 
Protein sequence
MKRLLPKPFI KDSLEYKSKK SNGFFIITYF LMIIAIASSP VSSADIEKTA GDSSITIIDD 
WGREVTLDKH AERIAFSHTA AGEGILLAGG WDKVVGRDGS LTDSRFYSNL DTIPAVSTPN
QAFSLDFEKI TELHPDLFII QKHYDSREQF DEIANKLEPD TPIVGLDFLE PENADSIKKL
SILIGTEQVA DDYVNFHDEI IKNLKEKTDT LSPDEKPNVF LKGGTTDKIS TFGRDASFWN
RMCSLAGGKN IADGLPGDNQ EVDLEWLTQQ DIDTIVGSCS YRNYPESFGY LATEPFHASE
KADEIIIDIK NNEIFSHSDA VLDDNVFLLE GTMISNPKAF IGSAYLAKWL HPDLFSDLDP
EQIHQEYLSR FIGTDYDLKN IGLFGYPANS